Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4039 |
Symbol | |
ID | 6484520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3929213 |
End bp | 3929893 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642739297 |
Product | hypothetical protein |
Protein accession | YP_002043006 |
Protein GI | 194445327 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.476407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATAC CCGCGAATTT TAACGGTCAA CGCCCTGCCA TTGATGCTAA CGACGCAGTA ATGCTGCTGA TTGACCACCA AAGTGGCCTG TTTCAGACCG TCGGCGACAT GCCGATGCCG GAATTACGCG CGCGCGCCGC GGCGCTGGCT AAGATCGCTA CCTTATGCAA TATGCCGGTC ATTACTACCG CATCCGTACC ACAGGGACCG AATGGTCCGC TGATTCCGGA AATCCATGCG AATGCACCCC ACGCGCAATA TGTCGCGCGT AAAGGGGAAA TTAATGCCTG GGATAATGCC GATTTTGTAC AAGCGGTAAA AGCGACAGGC CGTAAAACGC TGATCATCGC CGGTACTATT ACCAGTGTCT GCATGGCTTT TCCAGCCATC AGCGCCGTCG CGGAAGGGTA CAAGGTATTT GCGGTAATTG ATGCCTCCGG TACGTACAGT AAAATGGCGC AGGAAATTAC GATGGCCCGC GTGGTGCAGG CGGGCGTAGT ACCAATGGAT ACCGCGGCGG TAGCCTCTGA GCTGCAACGT ACCTGGAATC GGGAAGATGC CGCAGAATGG GCGGATGTAT ATACCAAAAT ATTCCCGGCC TATCAGCTAC TGATTGAAAG TTATACCAAA GCGCAGGAAG TAGTAAAAAA TAATGAACTG CTGGATTCTC AACGCGCATA A
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Protein sequence | MSIPANFNGQ RPAIDANDAV MLLIDHQSGL FQTVGDMPMP ELRARAAALA KIATLCNMPV ITTASVPQGP NGPLIPEIHA NAPHAQYVAR KGEINAWDNA DFVQAVKATG RKTLIIAGTI TSVCMAFPAI SAVAEGYKVF AVIDASGTYS KMAQEITMAR VVQAGVVPMD TAAVASELQR TWNREDAAEW ADVYTKIFPA YQLLIESYTK AQEVVKNNEL LDSQRA
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