Gene SNSL254_A4039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4039 
Symbol 
ID6484520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3929213 
End bp3929893 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content52% 
IMG OID642739297 
Producthypothetical protein 
Protein accessionYP_002043006 
Protein GI194445327 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.476407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATAC CCGCGAATTT TAACGGTCAA CGCCCTGCCA TTGATGCTAA CGACGCAGTA 
ATGCTGCTGA TTGACCACCA AAGTGGCCTG TTTCAGACCG TCGGCGACAT GCCGATGCCG
GAATTACGCG CGCGCGCCGC GGCGCTGGCT AAGATCGCTA CCTTATGCAA TATGCCGGTC
ATTACTACCG CATCCGTACC ACAGGGACCG AATGGTCCGC TGATTCCGGA AATCCATGCG
AATGCACCCC ACGCGCAATA TGTCGCGCGT AAAGGGGAAA TTAATGCCTG GGATAATGCC
GATTTTGTAC AAGCGGTAAA AGCGACAGGC CGTAAAACGC TGATCATCGC CGGTACTATT
ACCAGTGTCT GCATGGCTTT TCCAGCCATC AGCGCCGTCG CGGAAGGGTA CAAGGTATTT
GCGGTAATTG ATGCCTCCGG TACGTACAGT AAAATGGCGC AGGAAATTAC GATGGCCCGC
GTGGTGCAGG CGGGCGTAGT ACCAATGGAT ACCGCGGCGG TAGCCTCTGA GCTGCAACGT
ACCTGGAATC GGGAAGATGC CGCAGAATGG GCGGATGTAT ATACCAAAAT ATTCCCGGCC
TATCAGCTAC TGATTGAAAG TTATACCAAA GCGCAGGAAG TAGTAAAAAA TAATGAACTG
CTGGATTCTC AACGCGCATA A
 
Protein sequence
MSIPANFNGQ RPAIDANDAV MLLIDHQSGL FQTVGDMPMP ELRARAAALA KIATLCNMPV 
ITTASVPQGP NGPLIPEIHA NAPHAQYVAR KGEINAWDNA DFVQAVKATG RKTLIIAGTI
TSVCMAFPAI SAVAEGYKVF AVIDASGTYS KMAQEITMAR VVQAGVVPMD TAAVASELQR
TWNREDAAEW ADVYTKIFPA YQLLIESYTK AQEVVKNNEL LDSQRA