Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4030 |
Symbol | |
ID | 6482870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3920056 |
End bp | 3921438 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642739289 |
Product | putative transporter |
Protein accession | YP_002042999 |
Protein GI | 194444395 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGTG AAATTCTCTC CGTTAAGGAG AAGATTGGCT ATGGTATGGG CGATGCCGCC AGCCACATCA TCTTTGATAA TGTCATGTTA TATATGATGT TCTTCTATAC CGATATTTTC GGTATTCCCG CTGGTTTTGT CGGCACCATG TTTTTACTGG CGCGTGCGCT TGATGCCATC TCCGACCCTT GCATGGGCCT GCTGGCCGAC CGCACCCGCT CTCGCTGGGG CAAATTCCGG CCCTGGGTGC TGTTTGGCGC GTTGCCGTTT GGTATCGTTT GTGTGCTGGC TTATAGCACG CCGGACCTCA GTCTGAACGG CAAAATGATT TATGCCGCCA TCACCTACAC GTTGCTCACC CTTCTGTACA CTGTGGTCAA CATCCCTTAC TGCGCGTTGG GGGGTGTAAT AACCAATGAC CCAACGCAGC GTATCTCCCT GCAATCCTGG CGCTTTGTGC TGGCAACGGC GGGCGGAATG CTCTCTACCG TACTGATGAT GCCTCTGGTG AAACTGATTG GCGGCGAGAA TAAGGCGCTG GGCTTCCAGG GGGGTATCGC GGCGCTCTCG GTGGTGGCGT TCCTGATGCT GGCGTTCTGC TTCTTTACCA CCAAAGAGCG CGTTGAAGCG CCTGCCACCC ATACCTCCAT GCGTGAAGAC CTGCGTGATA TCTGGCACAA CGACCAGTGG CGCATAGTCG GCCTGCTCAC CATCCTGAAT ATTCTGGCGG TATGCGTGCG CGGCGGGGCG ATGATGTATT ACGTCACCTG GATATTGGGC AAACCGGGCG TGTTTGTCGC CTTCCTCACC ACCTATTGTG TCGGCAACCT GATTGGCTCG GCGCTGGCAA AACCGTTGAC CGACTGGAAA TGCAAAGTGA GCGTTTTCTG GTGGACCAAC GCCTTACTCG CAGTAATCAG CGTGGCGATG TTCTTCGTAC CGATGCACGC CACGATCGCT ATGTTCGTCT TTATCTTCGT GATTGGCGTA TTGCACCAGT TAGTCACGCC TATCCAGTGG GTGATGATGT CTGACACCGT CGACTACGGC GAATGGTGTA ACGGCAAACG CCTGACGGGG ATCAGTTTTG CCGGCACGTT GTTCGTGCTG AAACTGGGTC TTGCCCTCGG CGGGGCGCTG ATTGGCTGGA TGCTGGCAGG CGGCGGTTAC GACGCGGCGG CGAAAACGCA AAACAGCGCC ACGATCAGCA TCATCATCGC TCTGTTCACT ATCGTTCCGG CCATCTGTTA TCTGCTGAGC GCCGCGATCG CTAAACGCTA CTACACCCTG AAAAGCCCGT TCCTGAAAAC CATTCTGGAA CAACTGGCGC AGGGCGCACA CCGCAACGAA CAAGAATTTA CCCATAAAGA ATTGCAGAAC TAA
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Protein sequence | MKSEILSVKE KIGYGMGDAA SHIIFDNVML YMMFFYTDIF GIPAGFVGTM FLLARALDAI SDPCMGLLAD RTRSRWGKFR PWVLFGALPF GIVCVLAYST PDLSLNGKMI YAAITYTLLT LLYTVVNIPY CALGGVITND PTQRISLQSW RFVLATAGGM LSTVLMMPLV KLIGGENKAL GFQGGIAALS VVAFLMLAFC FFTTKERVEA PATHTSMRED LRDIWHNDQW RIVGLLTILN ILAVCVRGGA MMYYVTWILG KPGVFVAFLT TYCVGNLIGS ALAKPLTDWK CKVSVFWWTN ALLAVISVAM FFVPMHATIA MFVFIFVIGV LHQLVTPIQW VMMSDTVDYG EWCNGKRLTG ISFAGTLFVL KLGLALGGAL IGWMLAGGGY DAAAKTQNSA TISIIIALFT IVPAICYLLS AAIAKRYYTL KSPFLKTILE QLAQGAHRNE QEFTHKELQN
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