Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4006 |
Symbol | mutM |
ID | 6482843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3894282 |
End bp | 3895091 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642739266 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_002042976 |
Protein GI | 194445857 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.151676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAAT TACCCGAAGT TGAAACCAGC CGCCGGGGTA TTGAACCCCA TTTAGTTGGC GCTACTATCC TGCACGCCCA TATCCGTAAC GGCCGTCTGC GCTGGCCGGT TTCAGACGAA ATTTATCGTC TGAGCGATAC ACCCGTCCTT AGCGTTCAGC GTCGTGCTAA ATATTTACTG CTGGAGCTGC CTGACGGCTG GATAATTATT CACCTGGGGA TGTCGGGAAG CTTGCGGATA TTGTCGGAAG CGCTGCCGGC GGAAAAGCAC GACCATGTCG ATTTGGTGAT GAGCAATGGC AAAATTCTAC GTTATACCGA TCCTCGCCGC TTTGGCGCCT GGTTATGGAC CAAAGAGCTG GAAGGGCATA ACGTACTGGC GCATCTGGGA CCGGAGCCGC TAAGCGATGA GTTTAATGGC GAATATTTGC AGCAGAAATG CGCGAAGAAG AAGACGGCGA TTAAACCCTG GCTGATGGAT AACAAGCTGG TGGTCGGCGT GGGGAATATC TACGCCAGCG AGTCGCTGTT TGCCGCTGGT ATTCACCCTG ACCGCCTGGC GTCGTCACTC TCGACAGCGG AGTGCGACCT GCTGGCACAG GTGATTAAAG CCGTTTTGCT GCGCTCTATT GAACAAGGCG GGACAACGCT GAAGGATTTT CTGCAAAGCG ATGGGAAACC GGGCTATTTT GCCCAGGAGT TGCAGGTGTA CGGGCGCAAA GGCGAGCCGT GTCGGGTATG CGGTACGCCG ATAGTCGCAA CGAAACACGC ACAGCGTGCG ACGTTCTATT GCCGTCACTG TCAGAAGTAA
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Protein sequence | MPELPEVETS RRGIEPHLVG ATILHAHIRN GRLRWPVSDE IYRLSDTPVL SVQRRAKYLL LELPDGWIII HLGMSGSLRI LSEALPAEKH DHVDLVMSNG KILRYTDPRR FGAWLWTKEL EGHNVLAHLG PEPLSDEFNG EYLQQKCAKK KTAIKPWLMD NKLVVGVGNI YASESLFAAG IHPDRLASSL STAECDLLAQ VIKAVLLRSI EQGGTTLKDF LQSDGKPGYF AQELQVYGRK GEPCRVCGTP IVATKHAQRA TFYCRHCQK
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