Gene SNSL254_A3995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3995 
Symbol 
ID6483314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp3883244 
End bp3884053 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content38% 
IMG OID642739255 
Productlipopolysaccharide core biosynthesis protein 
Protein accessionYP_002042965 
Protein GI194442960 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGCG TTAACTTCAT AACTCACGCC GATGTTCTGC AACTTATTGC GAAAAGAACG 
GCTGAAGATT GTATTATTTT TCTTTCTGGT CCTACGTCCA GAAAGACGCC GCTGTCCTTG 
TTACGAATGA AAGATGTCAT TGCAGTCAAT GGTTCTGTTC AATATTTGCT AAACAATAAC 
GTCAAGCCAT TTTTGTACCT TCTGACGGAT GTTCGCTTCC TCCATCGTCG GCGCGAAGAT 
TTTTATAACT TTAGCCGTAA CAGTCAGTTT ACTATCGTCA ATCTTGATGT GTACGAACAG 
GCTTCAGTGG ATGATCAAAA ATATATTGAA GAAAACTGTT TAATTATTCG CTCCTTTTAT 
CGCCGAGAAA AAGGGGGCTT TTTAAAGAAA ATTAAATTTA ATATCCTCAA GCGGGTTCAT 
AAAGCATTAC TTATTTCAGT TCCCCTTTCG AAAAGAGGGC GACTGGCTGG ATTTTGCAAG 
GATATCAGCA TCGGGTATTG CTCTTGCCAT ACTATTGCTT ATACCGCTAT TCAGGTTGCC 
TATTCCCTCA AGTATGGCCG TATTATATGT TCTGGGCTTG ACTTAACAGG GAGTTGCCCA 
CGTTTCTATG ACGAATCTAC CAGCCCTATG CCATCTGAGC TTAGTAAAGA CCTGTTTAAA 
ATACTGCCAT TTTTTACTTT TATGAGAAAA AATGTGAGTG ATTTAAATAT CTTTAATTTA 
TCAGATGATA CTGCAATTCA TTACGATATT ATTCCATATA TTACAGCCTC GGAACTTGAG 
GATGAAATAT ATTACGATAA AATTGTCTAG
 
Protein sequence
MGSVNFITHA DVLQLIAKRT AEDCIIFLSG PTSRKTPLSL LRMKDVIAVN GSVQYLLNNN 
VKPFLYLLTD VRFLHRRRED FYNFSRNSQF TIVNLDVYEQ ASVDDQKYIE ENCLIIRSFY 
RREKGGFLKK IKFNILKRVH KALLISVPLS KRGRLAGFCK DISIGYCSCH TIAYTAIQVA 
YSLKYGRIIC SGLDLTGSCP RFYDESTSPM PSELSKDLFK ILPFFTFMRK NVSDLNIFNL 
SDDTAIHYDI IPYITASELE DEIYYDKIV