| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3992 |
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| Symbol | rfaC |
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| ID | 6483216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3879735 |
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| End bp | 3880688 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642739252 |
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| Product | ADP-heptose:LPS heptosyl transferase I |
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| Protein accession | YP_002042962 |
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| Protein GI | 194446473 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTTT TGATCGTTAA AACATCATCG ATGGGCGACG TATTACATAC CCTGCCTGCG
CTTACCGACG CGCAACAGGC GATTCCGGGG ATTCAATTTG ATTGGGTTGT CGAAGAAGGG
TTTGCACAAA TTCCGTCCTG GCACAGTGCT GTCGATCGCG TGATTCCCGT CGCTATTCGC
CGTTGGCGCA AAGCCTGGTT TTCCGCGCCC ATCAAAGCGG AACGCACAGC CTTTCGTCGG
GCGGTATGCG CAAACCAATA CGACGCTGTG ATTGATGCGC AGGGGCTGGT AAAAAGCGCG
GCGCTGGTGA CGCGTCTGGC GCATGGGATA AAGCACGGTA TGGACTGGAG TACCGCCCGC
GAACCGCTGG CCAGCCTGTT CTATAACCGT AAACACCATA TCGCAAAGCA ACAACATGCG
GTTGAACGGA CGCGCGAGCT GTTCGCCAAA AGCCTGGGAT ACGATAAACC GCAGTCGCAG
GGCGATTATG CCATCGCAAA ACATTTTCTG CATTGCCAGC AGGCGGTTAG CGATCCGTAT
GCGGTGTTTT TACATGCCAC GACCCGCGAT GATAAACACT GGCCGGAAGC AAACTGGCGC
GAGCTTATCG GCCTGGTGGG CAACACCGGA TTACGGATAA AACTTCCCTG GGGCGCGCCT
CATGAGGAGG CCCGGGCTAA ACGACTGGCC GAAGGCTTTG ACTATGTGGA TGTGTTACCG
CGCATGAGCC TGGAGGAGGT CGCCAGAGTG CTGGCTGGCG CAAAATTTGT CGTATCGGTT
GATACCGGCC TGAGCCATCT CACCGCCGCG CTCGACAGAC CGAATATTAC GCTATATGGC
CCAACGGACC CTGGGTTAAT TGGAGGTTAT GGGAAGAACC AAATGGCATG CTGCTCACCA
GAAAAAAACC TGGCGAATTT AGATGCCACA AGCGTATTCG GAAAGATTCA TTAA
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| Protein sequence | MRVLIVKTSS MGDVLHTLPA LTDAQQAIPG IQFDWVVEEG FAQIPSWHSA VDRVIPVAIR
RWRKAWFSAP IKAERTAFRR AVCANQYDAV IDAQGLVKSA ALVTRLAHGI KHGMDWSTAR
EPLASLFYNR KHHIAKQQHA VERTRELFAK SLGYDKPQSQ GDYAIAKHFL HCQQAVSDPY
AVFLHATTRD DKHWPEANWR ELIGLVGNTG LRIKLPWGAP HEEARAKRLA EGFDYVDVLP
RMSLEEVARV LAGAKFVVSV DTGLSHLTAA LDRPNITLYG PTDPGLIGGY GKNQMACCSP
EKNLANLDAT SVFGKIH
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