| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3991 |
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| Symbol | rfaF |
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| ID | 6482756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3878689 |
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| End bp | 3879735 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642739251 |
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| Product | ADP-heptose:LPS heptosyltransferase II |
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| Protein accession | YP_002042961 |
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| Protein GI | 194443073 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT TGGTCATTGG CCCGTCCTGG GTGGGCGACA TGATGATGTC GCAAAGTCTC
TATCGCACGC TTAAAGCGCG CTATCCCCAG GCGATAATCG ACGTGATGGC GCCAGCCTGG
TGCCGTCCGT TGTTATCGCG TATGCCGGAA GTTAACGAGG CGATACCCAT GCCGTTGGGC
CACGGCGCGC TGGAAATCGG CGAGCGCCGC AGATTGGGCC ATAGCCTGCG AGAGAGGCGC
TACGATCGCG CCTGGGTGCT GCCAAATTCG TTTAAATCAG CGCTGATTCC TTTCTTTGCC
AATATCCCGC ACCGTACCGG CTGGCGCGGC GAAATGCGCT ATGGCCTGCT GAACGATGCG
CGCGTCCTTG ATAAAGACGC CTGGCCGCTG ATGGTGGAGC GCTACGTGGC GCTGGCCTAT
GACAAGGGCG TGATGCGCAC GGCGAAAGAT CTGCCGCAGC CGCTGCTCTG GCCGCAGCTC
CAGGTTAGCG AAGGTGAAAA GTCGCTGATG TGCAGCGACT TTTCGCTATC TTCTGAACGT
CCTCTGATCG GCTTTTGCCC CGGCGCAGAA TTTGGCCCGG CAAAACGTTG GCCGCACTAT
CACTACGCCG AACTGGCAAA GCAGCTCATT AACGAAGGGT ATCAGGTCGT ACTGTTTGGC
TCGGCAAAAG ACCATGAAGC CGGAAATGAG ATCCTGGCGG CGCTGAATAG CGAGCAGCAG
GCATGGTGTC GCAACCTGGC GGGGGAAACC CAGCTGGAAC AGGCCGTCAT TCTGATAGCC
GCCTGTAAAG CCATCGTCAC TAACGATTCC GGACTGATGC ACGTCGCGGC GGCGCTCGAC
CGCCCGCTGG TCGCGTTGTA TGGCCCAAGT AGCCCGGATT TCACGCCGCC GCTGTCTCAT
AAGGCCCGGG TGATTCGTCT CATTACGGGT TACCACAAAG TGCGTAAAGG CGATACGGCG
CAAGGCTATC ACCAGAGCCT GATCGATATC ACGCCGCAGC GGGTTCTGGA AGAGCTTCAT
TCGCTGTTGT CGGAAGAGGG CGTTTAA
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| Protein sequence | MKILVIGPSW VGDMMMSQSL YRTLKARYPQ AIIDVMAPAW CRPLLSRMPE VNEAIPMPLG
HGALEIGERR RLGHSLRERR YDRAWVLPNS FKSALIPFFA NIPHRTGWRG EMRYGLLNDA
RVLDKDAWPL MVERYVALAY DKGVMRTAKD LPQPLLWPQL QVSEGEKSLM CSDFSLSSER
PLIGFCPGAE FGPAKRWPHY HYAELAKQLI NEGYQVVLFG SAKDHEAGNE ILAALNSEQQ
AWCRNLAGET QLEQAVILIA ACKAIVTNDS GLMHVAAALD RPLVALYGPS SPDFTPPLSH
KARVIRLITG YHKVRKGDTA QGYHQSLIDI TPQRVLEELH SLLSEEGV
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