Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3986 |
Symbol | |
ID | 6482590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3872842 |
End bp | 3873804 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642739246 |
Product | divergent polysaccharide deacetylase |
Protein accession | YP_002042956 |
Protein GI | 194445745 |
COG category | [S] Function unknown |
COG ID | [COG2861] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCTCAGT TTCGTCGCTC CATTCTCACG CTGGCCACTT TGCTGGCGTT TGCACATCCC GTTTTCGCTG GCAAGCTCGC CATCGTGATT GATGATTTTG GCTATCGCCC GCACACGGAA AACCAGGTTC TGGCGCTGCC GCCAAACATC TCCGTCGCCG TACTGCCCAA CGCGCCGCAC GCGCGCGAAA TGGCAACTAA AGCGCACAAT AGCGGGCATG AGGTGTTAAT CCATCTGCCG ATGGCGCCGC TAAGCAAACA GCCGCTGGAG AAGGATACGC TGCGACCAGA TATGAGCAGC GATGAGATCG AGCGCATTAT CCGCGAGGCG GTAAACAACG TGCCGTATGC CGTCGGGCTT AATAACCACA TGGGCAGCGC AATGACCTCC AGCCTGTTCG GTATGCAAAA AGTTATGCAG GCGCTGGAAC ATTACAATCT CTATTTTCTC GACAGCATGA CGATTGGCAA TAGCCAGGCG ATGCGCGCGG CATCCGGTAC GGGTGTGAAA GTGATCAAGC GCAAAGTGTT CCTCGACGAT ACGCAAAACG AGGCGGATAT CCGTCGTCAG TTTAATCGCG CTATCGAACT GGCCCGTCGC AACGGTTCCG CTATCGCGAT TGGTCATCCA CATCCCGCAA CGGTTCGCGT GCTGCAACAG ATGGTTTATC GCCTGCCGGC GGATATCACC CTGGTACGTC CAGGCAGCCT GCTCAACGAA CCGCAGGTAG ATACGTCCCG ACCTGGTGTG ACGCCGCAGA AAATTGACGC GCCGCGCAAT CCCTTTCGCG GCGTGAAGAT GTGCAAGCCG AAAAAACCGC TGCAACCGGT CTACGCTACG CGCTTTTTCA GCGTCATCGG CGAGAGCATT ACGCAAAGTT CCGTGGTTGT CTGGTTTCAG CATCAGTGGC AAGGCTGGGG GAAAATCGCC GCGCCTAAAA ACGTGAGCGC TAAGACAGAT TGA
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Protein sequence | MPQFRRSILT LATLLAFAHP VFAGKLAIVI DDFGYRPHTE NQVLALPPNI SVAVLPNAPH AREMATKAHN SGHEVLIHLP MAPLSKQPLE KDTLRPDMSS DEIERIIREA VNNVPYAVGL NNHMGSAMTS SLFGMQKVMQ ALEHYNLYFL DSMTIGNSQA MRAASGTGVK VIKRKVFLDD TQNEADIRRQ FNRAIELARR NGSAIAIGHP HPATVRVLQQ MVYRLPADIT LVRPGSLLNE PQVDTSRPGV TPQKIDAPRN PFRGVKMCKP KKPLQPVYAT RFFSVIGESI TQSSVVVWFQ HQWQGWGKIA APKNVSAKTD
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