| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3970 |
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| Symbol | |
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| ID | 6486209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3853706 |
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| End bp | 3858049 |
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| Gene Length | 4344 bp |
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| Protein Length | 1447 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642739230 |
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| Product | putative autotransporter |
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| Protein accession | YP_002042940 |
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| Protein GI | 194443588 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures |
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| COG ID | [COG5295] Autotransporter adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.800804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAA TATTTAAAGT CCTCTGGAAT GCCGCTACGG GAACATTTGT TGTCACCAGC
GAAACCGCAA AAAGCCGCGG CAAAAAAAAC GGCCGCAGAA AGCTGGCGGT TTCCGCACTC
ATCGGTCTTA GCAGCATTAT GGTTTCTGCG GATGCACTGG CCAACGCAGG AAACGATACA
GGCGACGGCG TTACTCCAAC GGGTACCCAG ACTGGAGGAA AAGGGTGGAT TGCAATTGGT
ACCGATGCCA CAGCCAATAC TTACACCAAC GTTGATGGCG CAAGCGCCGC AATGGGTTAT
AAAGCCTCCG CGATGGGGAA ATGGAGTACC GCCATTGGTT CCTACAGCCA GTCCACCGGC
GACTCTTCGT TAGCGCTTGG CGTAAAATCG GTTTCAGCCG GTGACCGGGC CATTGCAATG
GGCGCCTCAT CCTCAGCCAG TGGAAGTTAT TCAATGGCAA TGGGCGTGTA TGCCAATTCG
AGCGGCGCAA AATCGGTTGC GTTAGGTTAT AAATCTGTCG CGAGCGGAGC AACTTCCTCT
GCATTAGGTT ATCAAGCTAC TGCGAGCGGC GACGACAGCG CTGCTTTTGG TAATGGCGCA
AAAGCGATAG GCACCAACTC AGTTGCCCTT GGCTCGGGCT CTGTCGCCCA GGAAGACAAT
TCCGTCGCCG TGGGTAACAG CACCACTCAG CGGCAGATAA CCTACGTTGC TAAAGGCGAC
ATCAATTCCA CCAGTACCGA TGCCGTTACA GGTGCGCAAA TTTATTCTTT AAGTCAATCC
GTCGCCGACC GACTCGGCGG AGGGGCTTCC GTTAATAGTG ATGGTACAGT GAATGCGCCC
CTCTACGAGG TAGGCACAGG CATCTACAAT AACGTAGGTA GTGCATTAAG CGCACTTAAC
ACGTCTATCA CTAACACAGA GGCCTCTGTC GCAGGATTAG CCGAAGACGC GCTGTTGTGG
GATGAAAGCA TCAGCGCCTT TAGCGCTAGC CACACGGGAA ACGCCAGCAA AATCACCAAT
CTGGCGGCGG GTACCCTGGC TGCGGACAGC ACCGATGCCG TTAACGGCTC TCAGTTGTTT
GATACAAATG AGAAAGTGGA TAAGAACACT GCTGATATCG CCACCAATAC CGACAGCATT
AACCAGAACA CCACTGATAT CGCTGCCAAC ACCACCAGCA TCAATCAGAA CACCACTGAT
ATCGCCACCA ACACCACCAA TATCAACAGC CTGAGCGACT CCGTCACCAC GCTCACCGAT
GATGCACTGC TTTGGGATGC AGCCTCTGGC GCATTCAGCG CTAAGCACAA CGGAAGCGAC
AGCAAAATCA CCAATCTGGC GGCGGGTACC CTGGCCGCTG ACAGCACCGA CGCCGTTAAC
GGCTCTCAGT TGTTTGATAC AAATGAGAAA GTGGATCAGA ACACCGCTGA TATCACCACC
AATACCAACA GCATCAATCA GAACACCACT GATATTGCCA CCAACACCAC CAATATCAAC
AACCTGAGCG ATTCCATCAC CACGCTCACC GATGATGCCC TGTTGTGGGA TGCAGCCTCT
GGCGCATTCA GCGCTAAGCA CAACGGAAGC GACAGCAAAA TCACCAATCT GGCGGCGGGT
ACCCTGGCCG CTGACAGCAC CGACGCCGTT AACGGCTCTC AGCTGTTTGC CACCAACGAA
AATGTGTCTC AGAACACCAC TGATATCGCT GCCAACACCA CCAGCATCAA TCAGAACACC
ACTGATATCG CCACCAACAC CACCAGTATC AACAACCTGA GCAATTCCGT CACCACGCTC
ACTGACGATG CACTGCTATG GGATGCAGCC TCTGGCGCAT TCAGCGCTAA GCACAACGGA
AGCGCCAGTA AAATCATCAA TGTCGCCGCC GGGGACCTTT CTGAGGACAG TACAGACGCC
GTTAACGGCT CACAATTGTA TGAAACCAAC CAGAAGGTGG ATCAAAACAC CTCTGCTATC
GCAGATATTA ATACGTCCAT CACCAATCTT AGCTCTGACA ACCTGAGCTG GAATGAGACA
ACGAGTTCGT TCTCTGCCAG CCACGGAAGT AGTACGACAA ACAAAATCAC CAACGTTGCT
GCCGGGGAGC TGTCTGAAGA AAGTACCGAC GCGGTTAACG GATCGCAGCT GTTCGAAACC
AACGAAAAAG TGGATCAGAA CACGACCGAT ATCGCCGCCA ATACCACTAA CATCACTCAG
AACAGCACCG CGATTGAGAA CCTGAATACT TCTGTCTCCG ACATTAATAC GTCCATTACC
GGCCTCACTG ATAACGCTCT GTTATGGGAC GAAGACATCG GCGCTTTCAG CGCAAACCAC
GGTGGAAGCA CCAGTAAAAT AACCAATGTC GCCGCCGGGG CGCTTTCTGA GGACAGTACA
GACGCGGTAA ACGGCTCACA GTTGTATGAA ACTAACCAGA AGGTGGATCA AAACACCTCT
GCTATCGCGG ATATCAATAC GTCCATCACC AATCTTGGTA CCGATGCACT GAGCTGGGAT
GACGAAGAAG GCGCGTTCAG CGCCAGCCAC GGTACCAGCG GTACCAATAA GATAACCAAT
GTGGCTGCAG GTGAAATCGC CAGTGACAGT ACTGACGCTG TTAATGGCTC TCAGCTCTAT
GAAACTAACA TGCTGATTTC TCAGTATAGT GAATCTATTA GCCAACTAGC CGGCGATACC
AGCGAAACCT ATATCACGGA AAATGGTACC GGCGTGAAAT ACATCCGTAC GAATGATAAT
GGGCTTGAAG GCCAGGATGC ATACGCAACG GGTAACGGCG CAACGGCAGT AGGTTACGAC
GCCGTCGCCT CTGGCGCTGG CAGTCTGGCT CTTGGCCAAA ACAGCAGCAG CAGCATTGAG
GGCAGTATCG CTTTGGGCAG TGGCTCCACC TCTAACCGCG CTATTACAAC CGGTATACGA
GAAACGAGCG CAACAAGCGA TGGCGTCGTC ATTGGCTACA ATACAACAGA CAGAGAGTTG
CTGGGCGCGT TGTCATTGGG GACGGATGGA GAAAGCTATC GTCAAATTAC CAACGTTGCT
GACGGCTCTG AAGCGCAAGA TGCGGTAACA GTTCGTCAGT TACAAAATGC CATTGGTGCG
GTCACTACTA CACCGACCAA GTACTACCAC GCAAACTCAA CGGAAGAAGA TTCACTGGCT
GTCGGAACTG ACTCACTGGC AATGGGTGCG AAGACCATCG TCAATGCTGA TGCAGGTATT
GGTATTGGTC TGAATACACT GGTGATGGCT GATGCCATCA ACGGTATTGC TATCGGTTCT
AACGCACGCG CCAATCATGC AAACAGTATT GCAATGGGTA ATGGTTCTCA GACCACTCGC
GGCGCACAGA CTGACTACAC CGCCTACAAC ATGGACACAC CGCAGAACTC TGTCGGTGAG
TTCTCTGTCG GCAGTGAAGA CGGCCAACGT CAGATCACTA ACGTCGCGGC GGGTTCGGCA
GATACCGATG CCGTTAACGT GAGTCAATTG AAAGTAACGG ACGCGCAGGT TTCCAGGAAT
ACCCAGAGCA TTACTAACCT GAATACTCAG GTATCGAATC TGGATACCCG CGTCACCAAT
ATCGAAAACG GCATTGGCGA TATCGTCACT ACCGGTAGCA CCAAGTACTT CAAGACCAAC
ACCGATGGCG CAGATGCAAA TGCCCAGGGT GCGGACAGCG TCGCGATTGG CTCTGGCTCT
ATTGCTGCCG CTGAAAACAG CGTGGCGTTA GGCACAAATT CCGTCGCAGA TGAAGCTAAT
ACTGTGTCTG TCGGCTCTTC TACTCAACAA CGCCGTATTA CCAACGTTGC CGCAGGGGTG
AACAACACTG ACGCGGTTAA TGTGGCGCAA CTGAAAGCCT CAGAAGCAGG CTCCGTGCGT
TATGAAACCA ATGCAGATGG CTCGGTTAAC TATAGCGTGC TCAACCTGGG AGACGGGAGT
GGCGGCACCA CTCGGATCGG CAATGTTTCA GCGGCGGTGA ATGATACGGA TGCGGTTAAC
TATGCGCAAT TGAAACGCAG CGTCGAAGAA GCAAACACCT ATACCGACCA GAAAATGGGT
GAAATGAACA GCAAAATCAA AGGGGTAGAA AACAAGATGA GCGGCGGTAT CGCTTCAGCG
ATGGCGATGG CCGGTCTGCC ACAAGCCTAC GCCCCGGGCG CCAACATGAC CTCGATTGCT
GGCGGTACGT TTAATGGTGA AAGTGCCGTC GCCATTGGTG TCTCCATGGT AAGTGAAAGC
GGGGGCTGGG TGTATAAATT GCAAGGAACC AGCAACAGCC AGGGCGATTA CTCTGCAGCT
ATTGGCGCGG GCTTCCAGTG GTAA
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| Protein sequence | MNRIFKVLWN AATGTFVVTS ETAKSRGKKN GRRKLAVSAL IGLSSIMVSA DALANAGNDT
GDGVTPTGTQ TGGKGWIAIG TDATANTYTN VDGASAAMGY KASAMGKWST AIGSYSQSTG
DSSLALGVKS VSAGDRAIAM GASSSASGSY SMAMGVYANS SGAKSVALGY KSVASGATSS
ALGYQATASG DDSAAFGNGA KAIGTNSVAL GSGSVAQEDN SVAVGNSTTQ RQITYVAKGD
INSTSTDAVT GAQIYSLSQS VADRLGGGAS VNSDGTVNAP LYEVGTGIYN NVGSALSALN
TSITNTEASV AGLAEDALLW DESISAFSAS HTGNASKITN LAAGTLAADS TDAVNGSQLF
DTNEKVDKNT ADIATNTDSI NQNTTDIAAN TTSINQNTTD IATNTTNINS LSDSVTTLTD
DALLWDAASG AFSAKHNGSD SKITNLAAGT LAADSTDAVN GSQLFDTNEK VDQNTADITT
NTNSINQNTT DIATNTTNIN NLSDSITTLT DDALLWDAAS GAFSAKHNGS DSKITNLAAG
TLAADSTDAV NGSQLFATNE NVSQNTTDIA ANTTSINQNT TDIATNTTSI NNLSNSVTTL
TDDALLWDAA SGAFSAKHNG SASKIINVAA GDLSEDSTDA VNGSQLYETN QKVDQNTSAI
ADINTSITNL SSDNLSWNET TSSFSASHGS STTNKITNVA AGELSEESTD AVNGSQLFET
NEKVDQNTTD IAANTTNITQ NSTAIENLNT SVSDINTSIT GLTDNALLWD EDIGAFSANH
GGSTSKITNV AAGALSEDST DAVNGSQLYE TNQKVDQNTS AIADINTSIT NLGTDALSWD
DEEGAFSASH GTSGTNKITN VAAGEIASDS TDAVNGSQLY ETNMLISQYS ESISQLAGDT
SETYITENGT GVKYIRTNDN GLEGQDAYAT GNGATAVGYD AVASGAGSLA LGQNSSSSIE
GSIALGSGST SNRAITTGIR ETSATSDGVV IGYNTTDREL LGALSLGTDG ESYRQITNVA
DGSEAQDAVT VRQLQNAIGA VTTTPTKYYH ANSTEEDSLA VGTDSLAMGA KTIVNADAGI
GIGLNTLVMA DAINGIAIGS NARANHANSI AMGNGSQTTR GAQTDYTAYN MDTPQNSVGE
FSVGSEDGQR QITNVAAGSA DTDAVNVSQL KVTDAQVSRN TQSITNLNTQ VSNLDTRVTN
IENGIGDIVT TGSTKYFKTN TDGADANAQG ADSVAIGSGS IAAAENSVAL GTNSVADEAN
TVSVGSSTQQ RRITNVAAGV NNTDAVNVAQ LKASEAGSVR YETNADGSVN YSVLNLGDGS
GGTTRIGNVS AAVNDTDAVN YAQLKRSVEE ANTYTDQKMG EMNSKIKGVE NKMSGGIASA
MAMAGLPQAY APGANMTSIA GGTFNGESAV AIGVSMVSES GGWVYKLQGT SNSQGDYSAA
IGAGFQW
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