Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3953 |
Symbol | sgbH |
ID | 6482205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3834806 |
End bp | 3835468 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642739213 |
Product | 3-keto-L-gulonate-6-phosphate decarboxylase |
Protein accession | YP_002042923 |
Protein GI | 194442300 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0269] 3-hexulose-6-phosphate synthase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.362563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAC CATTACTGCA ACTGGCGCTC GACCACACCA GTCTGGAAGC AGCCCAACGC GATGTCGCCC TGCTACAGGA TCATGTCGAT ATCGTTGAGG CCGGAACCAT CCTTTGTTTA ACCGAAGGCC TTAGCGCGGT GAAAGCCCTG CGAGCGCAGT GCCCGGAAAA AATCATCGTC GCCGACTGGA AAGTGGCCGA TGCCGGTGAA ACCCTGGCGC AGCAGGCTTT TAGCGCTGGC GCTAACTGGA TGACTATCAT CTGTGCCGCG CCGCTCGCGA CCGTCGAGAA AGGCCATGCC GTCGCGCAAT CCTGCGGCGG TGAAATTCAA ATGGAACTAT TCGGCAACTG GACGCTGGAC GACGCCCGAG ACTGGTATCG CACCGGCGTG CGTCAGGCGA TTTACCACCG CGGACGCGAT GCGCAGGCCA GCGGGCAACA GTGGGGAGAA GCGGACCTAA CACGCATGAA GGCGTTGTCC GACATCGGCC TTGAACTATC GATTACCGGC GGTATTACCC CCGCCGATCT GCCGCTGTTC CGCGGCATTA ACGTTAAGGC ATTTATCGCC GGACGCGCGC TGGCAGGTGC CGCCCATCCG GCGCAGGTCG CCGCCGAATT CCACGCCCAA ATTGATGCCA TCTGGGGAGA AAAGCATGCG TAG
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Protein sequence | MSRPLLQLAL DHTSLEAAQR DVALLQDHVD IVEAGTILCL TEGLSAVKAL RAQCPEKIIV ADWKVADAGE TLAQQAFSAG ANWMTIICAA PLATVEKGHA VAQSCGGEIQ MELFGNWTLD DARDWYRTGV RQAIYHRGRD AQASGQQWGE ADLTRMKALS DIGLELSITG GITPADLPLF RGINVKAFIA GRALAGAAHP AQVAAEFHAQ IDAIWGEKHA
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