Gene SNSL254_A3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3953 
SymbolsgbH 
ID6482205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3834806 
End bp3835468 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content60% 
IMG OID642739213 
Product3-keto-L-gulonate-6-phosphate decarboxylase 
Protein accessionYP_002042923 
Protein GI194442300 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0269] 3-hexulose-6-phosphate synthase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.362563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAC CATTACTGCA ACTGGCGCTC GACCACACCA GTCTGGAAGC AGCCCAACGC 
GATGTCGCCC TGCTACAGGA TCATGTCGAT ATCGTTGAGG CCGGAACCAT CCTTTGTTTA
ACCGAAGGCC TTAGCGCGGT GAAAGCCCTG CGAGCGCAGT GCCCGGAAAA AATCATCGTC
GCCGACTGGA AAGTGGCCGA TGCCGGTGAA ACCCTGGCGC AGCAGGCTTT TAGCGCTGGC
GCTAACTGGA TGACTATCAT CTGTGCCGCG CCGCTCGCGA CCGTCGAGAA AGGCCATGCC
GTCGCGCAAT CCTGCGGCGG TGAAATTCAA ATGGAACTAT TCGGCAACTG GACGCTGGAC
GACGCCCGAG ACTGGTATCG CACCGGCGTG CGTCAGGCGA TTTACCACCG CGGACGCGAT
GCGCAGGCCA GCGGGCAACA GTGGGGAGAA GCGGACCTAA CACGCATGAA GGCGTTGTCC
GACATCGGCC TTGAACTATC GATTACCGGC GGTATTACCC CCGCCGATCT GCCGCTGTTC
CGCGGCATTA ACGTTAAGGC ATTTATCGCC GGACGCGCGC TGGCAGGTGC CGCCCATCCG
GCGCAGGTCG CCGCCGAATT CCACGCCCAA ATTGATGCCA TCTGGGGAGA AAAGCATGCG
TAG
 
Protein sequence
MSRPLLQLAL DHTSLEAAQR DVALLQDHVD IVEAGTILCL TEGLSAVKAL RAQCPEKIIV 
ADWKVADAGE TLAQQAFSAG ANWMTIICAA PLATVEKGHA VAQSCGGEIQ MELFGNWTLD
DARDWYRTGV RQAIYHRGRD AQASGQQWGE ADLTRMKALS DIGLELSITG GITPADLPLF
RGINVKAFIA GRALAGAAHP AQVAAEFHAQ IDAIWGEKHA