Gene SNSL254_A3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3947 
Symbol 
ID6483776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3828999 
End bp3829463 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content46% 
IMG OID642739207 
Producthypothetical protein 
Protein accessionYP_002042917 
Protein GI194444490 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2731] Beta-galactosidase, beta subunit 
TIGRFAM ID[TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTTG GACATATTGC GCAGCCTAAT CCGTGCCGGC TACCGTCGGC CATAGAGCAG 
GCGCTCGATT TCCTGCGCAA TACGGACTTT CGCACGCTGG AACCTGGCGT AGTGGAAATC
GACGGCAAAA ATATCTTCGC GCAGATTATC GATATGACCA CCCGCGATGC TGCTGAAAAT
CGTCCGGAAG TCCATCGCCG CTATCTGGAT ATTCAGTTTC TGGCATGGGG CGAAGAGACA
ATTGGGGTTG CCATTGACAC CGGTAATAAT CAAATCAGCG AGTCATTATT AGAACAGCGC
GATATTATTT TTTATCACGA CAGTGAACAT GAATCATTCA TTGAAATGAT ACCGGGAAGT
TATGCCCTGT TTTTCCCGCA GGATGTTCAT CGTCCAGGTT GTAATAAAAG CATTGCTACG
CCGATACGGA AAATAGTCGT AAAAGTCGCC ATAGACGTTT TATAA
 
Protein sequence
MIFGHIAQPN PCRLPSAIEQ ALDFLRNTDF RTLEPGVVEI DGKNIFAQII DMTTRDAAEN 
RPEVHRRYLD IQFLAWGEET IGVAIDTGNN QISESLLEQR DIIFYHDSEH ESFIEMIPGS
YALFFPQDVH RPGCNKSIAT PIRKIVVKVA IDVL