| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3943 |
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| Symbol | avtA |
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| ID | 6485776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3825082 |
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| End bp | 3826332 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642739203 |
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| Product | valine--pyruvate transaminase |
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| Protein accession | YP_002042913 |
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| Protein GI | 194443933 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3977] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.796758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTTT CACTTTTCGG CGATAAATTT ACCCGCCATT CAGGCATTAC CCGCCTGATG
GAGGATCTCA ACGACGGCTT ACGCACGCCA GGCGCCATCA TGCTTGGCGG CGGTAACCCG
GCACACATCC CTGCAATGCA GGATTATTTC CAGACGCTAC TGACAGAGAT GGTAGAAAGC
GGCAAAGCCG CTGATGCGCT TTGTAATTAT GACGGTCCCC AGGGAAAAAC GGCGCTACTG
AATGCACTGG CCGTACTGCT ACGTGAAACG CTGGGATGGG ATATCGAACC ACAGAATATT
GCGCTGACAA ATGGCAGTCA GAGCGCGTTT TTCTACTTAT TTAATCTCTT CGCCGGACGT
CGCGCCGACG GCAGTACGAA AAAGGTACTA TTCCCGCTTG CGCCGGAATA CATCGGCTAT
GCAGATTCCG GTCTGGAAGA CGACCTCTTC GTTTCGGCGC GCCCGAATAT TGAACTGCTG
CCGGAAGGCC AGTTTAAGTA TCACGTCGAT TTTGAGCATC TGCACATCGG CGAAGAAACG
GGGATGATTT GCGTCTCGCG CCCGACCAAC CCAACCGGTA ACGTTATCAC CGACGAAGAG
CTGATGAAGC TGGACAGACT GGCGAATCAG CACAACATCC CACTGGTGAT TGATAACGCT
TACGGTGTAC CGTTTCCGGG CATTATCTTT AGCGAGGCGC GCCCGCTGTG GAACCCCAAT
ATTATCCTGT GTATGAGCCT CTCGAAGCTG GGGCTGCCCG GTTCCCGCTG CGGGATTATC
ATCGCCAATG ATAAGACGAT TACCGCCATT GCCAACATGA ACGGCATCAT CAGCCTTGCG
CCCGGGGGCA TGGGCCCGGC GATGATGTGC GAAATGATTA AGCGTAACGA TCTGCTGCGG
CTGTCGGAAA CGGTTATCAA ACCTTTCTAC TATCAGCGCG TTCAACAGAC GATCGCGATC
ATTCGTCGCT ATTTATCCGA AGAACGCTGC CTGATTCATA AACCGGAAGG CGCAATATTT
TTGTGGCTGT GGTTTAAAGA TCTGCCGATT ACCACCGAGC TACTCTATCA ACGCTTGAAA
GCGCGCGGCG TGCTGATGGT GCCAGGCCAC TATTTCTTTC CCGGACTGGA TAAACCCTGG
CCGCATACAC ACCAGTGTAT GCGGATGAAC TACGTGCCTG AACCGGACAA AATCGAGGCG
GGCGTAAAAA TTCTGGCAGA AGAGATAGAA CGCGCCTGGC GTGAAGGCTG A
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| Protein sequence | MTFSLFGDKF TRHSGITRLM EDLNDGLRTP GAIMLGGGNP AHIPAMQDYF QTLLTEMVES
GKAADALCNY DGPQGKTALL NALAVLLRET LGWDIEPQNI ALTNGSQSAF FYLFNLFAGR
RADGSTKKVL FPLAPEYIGY ADSGLEDDLF VSARPNIELL PEGQFKYHVD FEHLHIGEET
GMICVSRPTN PTGNVITDEE LMKLDRLANQ HNIPLVIDNA YGVPFPGIIF SEARPLWNPN
IILCMSLSKL GLPGSRCGII IANDKTITAI ANMNGIISLA PGGMGPAMMC EMIKRNDLLR
LSETVIKPFY YQRVQQTIAI IRRYLSEERC LIHKPEGAIF LWLWFKDLPI TTELLYQRLK
ARGVLMVPGH YFFPGLDKPW PHTHQCMRMN YVPEPDKIEA GVKILAEEIE RAWREG
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