Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3938 |
Symbol | xylB |
ID | 6486732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3817264 |
End bp | 3818718 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642739198 |
Product | xylulokinase |
Protein accession | YP_002042908 |
Protein GI | 194445502 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.856967 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATATCG GGATCGATCT TGGTACATCG GGTGTAAAAG CTATCCTGTT GAATGAGCAG GGCGATGTGC TGGCTACGCA TACTGAAAAA CTGACCGTAT CGCGTCCGCA TCCCTTATGG TCGGAACAGG AACCAGAGCA GTGGTGGCAG GCGACGGATC GTGCGGTTAA AGGTTTAGGT CGGCAACAGT CGTTAAGTGG CGTCCGGGCG TTGGGCATCG CCGGACAAAT GCATGGCGCG ACATTACTTG ATAGCCGTCA GCAGGTTCTG CGACCAGCGA TTTTATGGAA TGACGGACGC TGTAGCGAAG AGTGCGCCTG GCTGGAAAAA CAGGTGCCGC AGTCGCGTGC GATAACCGGT AATCTGATGA TGCCCGGTTT TACCGCGCCC AAATTAATCT GGGTGCAGCG CCACGAACCG GATATTTTCT ACCAGATAGA CAAGGTTCTG CTGCCGAAAG ATTTTCTGCG GCTGCGAATG ACAGGCGTCT TTGCCAGCGA TATGTCGGAT GCGGCGGGAA CGATGTGGCT GGACGTGAAA AAGCGCGACT GGAGCGACGT TATGCTCAAC GCCTGTCATT TAACCCGACA GCAGATGCCA GCGTTATTTG AAGGTAGTGA CATTACCGGA ACGTTGCTGC CGGAGGTAGC CAGCGCATGG GGAATGCCAA CAGTACCCGT GGTGGCGGGC GGCGGCGACA ATGCGGCAGG CGCGGTCGGC GTAGGAATGA TCGATGCCGG ACAGGCGATG CTCTCGCTCG GAACATCGGG CGTCTATTTT GCCGTCAGCG ACGGCTTTCT GAGTAAACCG GAGAGCGCAG TACACAGTTT TTGCCATGCG CTGCCGGAAC GCTGGCATTT AATGTCTGTG ATGTTGAGCG CCGCCTCTTG TCTGGACTGG GCGGCTAAAC TCACCGGGCA GGAGAACGTC CCGGCGCTGA TTGCCGCCGC ACAGCAGGCG GATGAGCATG CCGATTCGAT CTGGTTTTTG CCGTACCTGT CCGGCGAGCG CACGCCGCAC AATAATCCGC AGGCAAAAGG CGTTTTCTTT GGTTTAACCC ATCAGCATGG CCCGGCGGAA CTGGCGCGGG CGGTACTGGA GGGCGTGGGA TATGCTTTGG CGGACGGTAT GGATGTGGTT CACGCCTGCG GCGTCAAACC CGCCAGCGTG ACGCTTATCG GCGGCGGGGC GCGCAGCGAA TACTGGCGTC AGATGCTATC TGATATTAGC GGGCTACAGC TTGATTATCG TACTGGCGGC GATGTAGGGC CAGCGCTGGG TGCGGCGCGT CTGGCGCAAA TTGCGGTGAA TAAACAGACT CCGCTCGCCG ATGTATTGCC GCAGTTGCCG CTGGAGCAGG CGCATTATCC TGATGCGCAG CGTCATACGG TTTATCAACA ACGTCGTGAA ACCTTCCGTC GACTTTATCA GCAGCTGTTG CCGTTGATGT CCTAA
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Protein sequence | MYIGIDLGTS GVKAILLNEQ GDVLATHTEK LTVSRPHPLW SEQEPEQWWQ ATDRAVKGLG RQQSLSGVRA LGIAGQMHGA TLLDSRQQVL RPAILWNDGR CSEECAWLEK QVPQSRAITG NLMMPGFTAP KLIWVQRHEP DIFYQIDKVL LPKDFLRLRM TGVFASDMSD AAGTMWLDVK KRDWSDVMLN ACHLTRQQMP ALFEGSDITG TLLPEVASAW GMPTVPVVAG GGDNAAGAVG VGMIDAGQAM LSLGTSGVYF AVSDGFLSKP ESAVHSFCHA LPERWHLMSV MLSAASCLDW AAKLTGQENV PALIAAAQQA DEHADSIWFL PYLSGERTPH NNPQAKGVFF GLTHQHGPAE LARAVLEGVG YALADGMDVV HACGVKPASV TLIGGGARSE YWRQMLSDIS GLQLDYRTGG DVGPALGAAR LAQIAVNKQT PLADVLPQLP LEQAHYPDAQ RHTVYQQRRE TFRRLYQQLL PLMS
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