Gene SNSL254_A3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3936 
Symbol 
ID6482365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp3816736 
End bp3817089 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content51% 
IMG OID642739196 
Producthypothetical protein 
Protein accessionYP_002042906 
Protein GI194444981 
COG category[S] Function unknown 
COG ID[COG4682] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.624616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC ACGTTGCGCG CAGGAAACGG ATATTCGGCC TGGGAATGTT AGTTGTCGGT 
GCAGTGGTAT ACCTGGTGGG ACTGTGGCCA GGCTGTCATA CATTAAGCGA AAAGGGATAT 
TTTTTTGCGG CAATCGTCAT GTGTGGTTTT CCAGTCTTAA TTCGCCAGGA ACACACGGGA 
AATGGCCGCT TGCTTTCTCG TTGCAAATCT TTGCTGTTGC TTGGCATCGG CATGGTCGCG 
GTCGGCGTAT TTAACCTGGC GCTGGCGGGC GCGCTGAAAA TACTGTGTCT GGTGGCGCTG 
GGGGTCAGTA TATATGGAAC CGATCTTTAC GCTTCCTACA GTGATGATGA ATGA
 
Protein sequence
MDDHVARRKR IFGLGMLVVG AVVYLVGLWP GCHTLSEKGY FFAAIVMCGF PVLIRQEHTG 
NGRLLSRCKS LLLLGIGMVA VGVFNLALAG ALKILCLVAL GVSIYGTDLY ASYSDDE