Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3923 |
Symbol | |
ID | 6485714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3805027 |
End bp | 3807360 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642739183 |
Product | biotin sulfoxide reductase |
Protein accession | YP_002042893 |
Protein GI | 194443080 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.937494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 0.611984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACCCACG CACCATCGCG TCATTCGGTA TTGACCGCCG CACACTGGGG GCCAGTCCGC GTTGAAACCG ACGGAGAACG CATTTTTGCC TCGTATGGCG AACTCCCGAC GGCACACCAA AATTCCCTGC AAACCGTTGT GCATGACCAG GTTCACAGTA AAACGCGGGT TCGCTTCCCG ATGGTGCGTA AAGGGTTCCT GGCTTCCCCC GATAAGCCGC AGGGCATACG CGGGCAGGAT GAGTTTGTTC GCGTAAGTTG GGATGACGTG CTGGATCTGA TCCACGCTCA GCACAAACGT ATTCGCGAAA GTTATGGGCC ATCGTCCATC TTCGCCGGCT CCTACGGCTG GCGTTCGAAC GGCGTATTGC ATAAAGCGGC TACGCTATTG CAGCGTTACA TGGCGCTGGC GGGAGGGTAT ACCGGCCATC TTGGCGATTA TTCCACCGGC GCGGCGCAGG CTATCATGCC TTATGTGGTG GGTGGCAACG AGGTTTACCA GCAGCAGACT AGCTGGCCGG TGGTGCTGGA ACACAGCGAG GTGGTGGTGC TCTGGAGCGC GAACCCGCTG AATACTCTGA AAATTGCCTG GAATGCCTCG GATGAACAGG GGCTCGACTA TTTTGCGGCG TTGCGACAAA GCGGCAAGCG CCTGATCTGC ATCGATCCGA TGCGATCGGA AAGCGTCGAC TTTTTTGGCG ATAAGATGGA GTGGATCGCC CCGCATATGG GCACCGATGT GGCGTTAATG TTGGGGATCG CCCATACGCT GGTGGAAAAC GGTTGGCAGG ATGAAGCGTT CCTTGCCCGC TGCACAACGG GTTATGACCG CTTCGCCGAC TATCTTTTGG GCACGACCGA CGGTACGGCC AAAACAGCGG AATGGGCGGC GGAAATTTGC GGCGTTTCTG CGGTGAAAAT CCGCGAACTG GCGGAAATAT TTCATCATAA CACCACCATG TTGATGGCCG GTTGGGGAAT GCAGCGTCAG CAGTTCGGCG AGCAAAAGCA CTGGATGATC GTTACGCTGG CCGCAATGCT GGGGCAGATT GGTACGCCTG GCGGCGGGTT TGGTTTTTCT TATCATTTTG CTAACGGCGG AAACCCGACG CGCCGCGCCG CCGTGTTAGC CTCGATGCAG GGAAGCATCC CTGGCGGGGT CGATGCGGTA GATAAAATAC CGGTGGCGCG TATTGTCGAG GCGCTGGAAA ACCCCGGTGG GTTTTACCAA CACAATGGGA TGGATCGCCG CTTCCCGGAT ATTCGTTTTA TCTGGTGGGC GGGCGGCGCG AACTTTACCC ATCATCAGGA TACCAACCGT CTGATTCGCG CGTGGCAAAA ACCGGAACTG GTCGTTATCT CGGAATGTTT CTGGACGGCC GCCGCGAAAC ACGCGGATAT TGTTCTGCCT GCGACCACCA GCTATGAGCG TAACGATTTA ACCATGACCG GCGACTATAG CAATCAGCAT TTGGCGCCGA TGAAGCAGGT CGTGTCGCCC CGGTGGGAGG CGCGGAATGA TTTTGACGTT TTTGCTGAAC TGAGCGAACG GTGGGAAGCC GGCGGTTACG CTCGGTTCAC CGAAGGAAAA AGCGAGCTGG CGTGGCTGGA GACTTTCTAC AATATTGCCG CCCAGCGTGG CGCCAGCCAG GGGGTGACGC TGCCGCCGTT TGCCGCATTC TGGCAGGCTA ACCGTTTACT GGAGATGCCG GAAAATCCCG CCAACGCGCA GTTTGTGCGC TTCGCGGATT TTCGCCGCGA TCCTGATAAC CATCCGCTAA AAACGGCCAG CGGCAAAATC GAAATCTATT CTGCGCGCAT TGCCAGCTAT GGTTATGCGG ATTGTCCCGG TCATCCGATG TGGCTGGCGC CGGATGAGTG GCACGGGAAC GCCGATGCGG GGCAGGTTCA GCTACTTTCC GCGCATCCGG CGCACCGTCT GCATAGCCAG CTTAACTACA GTTCGTTACG GGAGCGGTAT GCGGTGGCCG GACGCGAACC GGTGACGATT CATCCGCAGG ATGCGACAAC GCGCGGAATC GTCGATGGCG ATACGGTACG CGTCTGGAAT CATCGCGGGC AGGTTCTGGC GGGCGCGGTC GTTACCGACG GAATTCGGCC TGGCGTTATC TGTATTCACG AAGGCGCATG GCCGGACCCT GAACCTACCG CAGGCGGCAT ATGCAAAAAC GGCGCGGTAA ACGTCCTGAC AAAAGATCTT CCCAGTTCCC GGCTGGGGAA CGGTTGTGCG GGCAACACCG CGCTGGTCTG GTTTGAGAAA TATACCGGCC CGGCGCTACC GCTTACGGCG TTTGATCCGC CTGCCAACTC ATAA
|
Protein sequence | MTHAPSRHSV LTAAHWGPVR VETDGERIFA SYGELPTAHQ NSLQTVVHDQ VHSKTRVRFP MVRKGFLASP DKPQGIRGQD EFVRVSWDDV LDLIHAQHKR IRESYGPSSI FAGSYGWRSN GVLHKAATLL QRYMALAGGY TGHLGDYSTG AAQAIMPYVV GGNEVYQQQT SWPVVLEHSE VVVLWSANPL NTLKIAWNAS DEQGLDYFAA LRQSGKRLIC IDPMRSESVD FFGDKMEWIA PHMGTDVALM LGIAHTLVEN GWQDEAFLAR CTTGYDRFAD YLLGTTDGTA KTAEWAAEIC GVSAVKIREL AEIFHHNTTM LMAGWGMQRQ QFGEQKHWMI VTLAAMLGQI GTPGGGFGFS YHFANGGNPT RRAAVLASMQ GSIPGGVDAV DKIPVARIVE ALENPGGFYQ HNGMDRRFPD IRFIWWAGGA NFTHHQDTNR LIRAWQKPEL VVISECFWTA AAKHADIVLP ATTSYERNDL TMTGDYSNQH LAPMKQVVSP RWEARNDFDV FAELSERWEA GGYARFTEGK SELAWLETFY NIAAQRGASQ GVTLPPFAAF WQANRLLEMP ENPANAQFVR FADFRRDPDN HPLKTASGKI EIYSARIASY GYADCPGHPM WLAPDEWHGN ADAGQVQLLS AHPAHRLHSQ LNYSSLRERY AVAGREPVTI HPQDATTRGI VDGDTVRVWN HRGQVLAGAV VTDGIRPGVI CIHEGAWPDP EPTAGGICKN GAVNVLTKDL PSSRLGNGCA GNTALVWFEK YTGPALPLTA FDPPANS
|
| |