| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3917 |
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| Symbol | |
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| ID | 6484161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3801373 |
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| End bp | 3802071 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642739177 |
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| Product | putative pili assembly chaperone, N- domain |
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| Protein accession | YP_002042887 |
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| Protein GI | 194445517 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.878446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCT CACGTTTGAT ATCTTGCACA GCACTGGTGC TGGCGTTGAT TGCTCAAAAC
AGTTTTGCCG GAGGCGTGGC ATTAAGCAGC ACGCGTGTTA TTTATGACGG TAGTAGAAAG
GAAGCTTCTC TTACGGTAAA TAATAAAAGC ACCACGGATG AATTTCTCAT TCAGTCATGG
ATTGATGATG CTAACGGTAA TAAAAAGACG CCCTTTATCA TCACTCCACC GTTATTTAAA
TTAAGCCCGA CTAAAAATAA CGTTTTACGT ATTGTTAATA CGACGAACAC GTTACCGCAG
GATCGCGAGT CCGTTTATTG GATTAACGTA AAAGCTATTC CTGCCAAAAG TGAAGACGCG
GAAGCTAAAA ACGTACTGCA GATCGCCGTA CGTACCCGCT TAAAACTGTT CTATCGCCCG
GCGGGCCTGA AAGGCAATAG CATGGACGGC TGGAACAAAC TGCAGTTCAC CAGCGCAGGG
GCTAACCAGA TCAAAGTGGA AAACCCATCT GCCTTTAACC TGACGTTTAA TAAATTTTAT
GCCAACGGCC GTGATATTGA AAAAACGGGA ATGGTTCCGG CAAAAGGCTC ATTGAATATT
GAACTGCCAG CCGGCACCGG CAAGGTAAGC GAAGTTAAAT ACAACATTAT TAATGACTTT
GGCACGGCTG GCGACATGTT GACACAGCGC GTTAACTAA
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| Protein sequence | MNRSRLISCT ALVLALIAQN SFAGGVALSS TRVIYDGSRK EASLTVNNKS TTDEFLIQSW
IDDANGNKKT PFIITPPLFK LSPTKNNVLR IVNTTNTLPQ DRESVYWINV KAIPAKSEDA
EAKNVLQIAV RTRLKLFYRP AGLKGNSMDG WNKLQFTSAG ANQIKVENPS AFNLTFNKFY
ANGRDIEKTG MVPAKGSLNI ELPAGTGKVS EVKYNIINDF GTAGDMLTQR VN
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