Gene SNSL254_A3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3908 
Symbol 
ID6483563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp3792521 
End bp3793645 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content58% 
IMG OID642739170 
ProductPQQ enzyme repeat 
Protein accessionYP_002042881 
Protein GI194444096 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.998935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACACT TAACTCAGGA CTCGACTTTT ACCCTTGGAC GCCGTCCGGC GGGCCTTATC 
TACGCTGATA AGGCGAAGAG CTTTGGCGGC TATACGCTTT TTGCGCCGCA AACCGCCGAA 
GGGCGGGTTT ACCTGGTGGA CGAGCAGGGC GAAGTCGCGC ATCAGTGGCA GCTTCCGGTT 
CGCGCCGGGC GTGATGCGGT GCTGCTGCCG AACGGTAATC TGGGTTATAA CGGCAGCCAC 
CGCACTTCAG CGAACCTCTA TCCGGCGTGG GATCTCTGGC ACGGCGGCGA CTTCTACGAA 
GTGACGCCGG ATAACGAAAT CGTCTGGCAC TATGAAGACA TCTTCCATCA CCATGATGCG 
CAATGGTTGG CGAACGGTAA TCTGCTGTAT ACCGCCGCGT CGCCGTTGCC TGCCGATATC 
GCCGCCCGTG TTACCGGCGG CGACCCGCGC CGCGATGCGC CGGACGGCGT GATTCAGAGT 
GACGTCGTCA AAGAGGTCAA TCGCGACGGT GAAGTGGTGT GGGAATGGCG TGCCTGGGAG 
CATTTGAATC CGGAAGATTT CCCGATTCAT GATATTTTCG ACCGCCGCCA CTGGCCGATG 
ATTAACGGCC TGTCCGTCAC CCGTGATGGC CTGGTACTGA TGAGCCTGCG TACCACTTCC 
GGCGTCATTG CCGTGGATAA AGAGAGCGGG AAGGTTATCT GGCATGCAGG GCCGGAAGTG 
GTAGCGCAGC AGCACACGCC GGTTGAGATG GAGAGCGGGT CGATTCTGGT TTTCGATAAC 
GGCAACCTGC GTCCCGGCGT CACCTCGCCG CATTCCACGG TGCTGGAGTT CGATCCGCAG 
ACCAAAGCGA TTACCTGGCA GTATCGCGAT ATCTTCCCGC CGGCGTTTTT CTCGCCGTAT 
ATGGGGAGCG CGCAGCGGCT GGCGAACGGC AACACCTTTA TCTGTGAATC GGCGTTTGGC 
CGCCTGTTTG AAGTCACCCC GGAAGGCGAA ACGGTATGGG AATATATCAT TCCGTTCTTT 
AATGAATATC CGGAGCACCT CAGTAAAGGC ATTATTCCTG GAAAACAGAA CAGCGCCTTC 
CGTGCGCATC GCTATGCCGC TGATGCCATT AGTTGGTTGA AATAA
 
Protein sequence
MAHLTQDSTF TLGRRPAGLI YADKAKSFGG YTLFAPQTAE GRVYLVDEQG EVAHQWQLPV 
RAGRDAVLLP NGNLGYNGSH RTSANLYPAW DLWHGGDFYE VTPDNEIVWH YEDIFHHHDA 
QWLANGNLLY TAASPLPADI AARVTGGDPR RDAPDGVIQS DVVKEVNRDG EVVWEWRAWE 
HLNPEDFPIH DIFDRRHWPM INGLSVTRDG LVLMSLRTTS GVIAVDKESG KVIWHAGPEV 
VAQQHTPVEM ESGSILVFDN GNLRPGVTSP HSTVLEFDPQ TKAITWQYRD IFPPAFFSPY 
MGSAQRLANG NTFICESAFG RLFEVTPEGE TVWEYIIPFF NEYPEHLSKG IIPGKQNSAF 
RAHRYAADAI SWLK