| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3897 |
|---|
| Symbol | yhjU |
|---|
| ID | 6485778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 3780973 |
|---|
| End bp | 3782652 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642739161 |
|---|
| Product | cellulose synthase operon protein YhjU |
|---|
| Protein accession | YP_002042872 |
|---|
| Protein GI | 194446406 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03368] cellulose synthase operon protein YhjU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGC ATACTCAAAC TCCTTCAATG CCTTCTCCGC TCTGGCAATA CTGGCGCGGT
CTTTCCGGCT GGAACTTCTA TTTTCTGGTC AAGTTTGGCC TGCTGTGGGC AGGCTATCTG
AATTTTCATC CTTTACTGAA TCTGGTATTC ATGGCGTTTC TGCTCATGCC AATACCAAAG
TATCGCCTTC ACCGGTTGCG CCACTGGATT GCCATTCCCG TCGGCTTCGC GCTGTTCTGG
CATGATACCT GGCTGCCCGG CCCGCAAAGC ATTATGAGCC AGGGGACGCA GGTGGCGGAA
TTCAGCTCCG GTTATCTGCT CGATCTGATC GCCCGTTTTA TTAACTGGCA AATGATCGGC
GCCATCTTCG TACTGCTGGT TGCCTGGCTT TTTTTATCAC AGTGGATTCG GGTCACGGTG
TTTGTGGTCG CCATCATGGT ATGGCTGAAT GTCCTGACAT TAACCGGCCC GGTTTTTACG
CTGTGGCCGG CAGGCCAGCC AACCGATACG GTGACGACGA CTGGCGGTAA TGCGGCCGCT
ACCGTCGCGA CAGCGGGCGA TAAGCCGGTC ATCGGCGATA TGCCTGCGCA AACCGCGCCG
CCGACGACCG CGAATCTGAA CGCCTGGTTG AACACCTTCT ATGCCGCGGA AGAAAAGCGG
AAAACGACGT TCCCGGCGCA GCTTCCGCCT GATGCGCAGC CGTTCGACCT ATTGGTCATC
AATATTTGTT CGCTCTCCTG GTCGGATGTC GAAGCGGCAG GCTTGATGTC ACATCCGCTA
TGGTCGCACT TTGACATTTT GTTTAAACAC TTTAATTCCG GTACGTCTTA CAGCGGCCCG
GCGGCCATTC GTCTGCTGCG CGCCAGCTGT GGTCAACCAT CGCATACCCG ACTTTATCAA
CCAGCCGATA ACGAATGTTA TCTGTTTGAT AATCTGGCGA AGCTGGGCTT TACTCAGCAT
CTGATGATGG ATCATAACGG TGAATTTGGC GGCTTCCTGA AAGAAGTTCG CGAAAACGGC
GGTATGCAGA GCGAACTGAT GAACCAGTCC GGCCTGCCAA CCGCCCTGCT GTCATTCGAC
GGCTCGCCGG TATATGACGA TCTGGCGGTC CTGAACCGCT GGTTGACAGG GGAAGAACGT
GAAGCCAATT CCCGCTCCGC GACTTTCTTT AACCTGCTGC CGCTGCACGA TGGCAACCAC
TTCCCCGGCG TCAGCAAAAC GGCGGATTAT AAAATCCGCG CGCAGAAACT GTTCGATGAA
CTGGACGCCT TCTTCACCGA ACTGGAGAAA TCCGGGCGTA AGGTGATGGT GGTCGTCGTA
CCGGAGCACG GCGGCGCGCT GAAGGGCGAC AGAATGCAGA TCTCAGGCCT GCGCGATATT
CCCAGCCCCT CCATCACCAA CGTCCCGGCG GGCGTGAAAT TTTTTGGCAT GAAAGCCCCG
CATGAGGGCG CGCCGATTGA TATTAACCAG CCGAGCAGCT ACCTGGCAAT TTCCGAACTG
GTCGTACGCG CCGTGGACGG TAAGCTCTTT ACCGAAGACA GTGTGAACTG GAACAAGCTG
ACCAGCAATC TGCCGCAAAC CGCGCCGGTT TCAGAAAACG CTAATGCGGT GGTGATTCAG
TATCAGGGTA AGCCCTACGT TCGTCTGAAT GGCGGCGACT GGGTGCCTTA CCCGCAGTAA
|
|---|
| Protein sequence | MTQHTQTPSM PSPLWQYWRG LSGWNFYFLV KFGLLWAGYL NFHPLLNLVF MAFLLMPIPK
YRLHRLRHWI AIPVGFALFW HDTWLPGPQS IMSQGTQVAE FSSGYLLDLI ARFINWQMIG
AIFVLLVAWL FLSQWIRVTV FVVAIMVWLN VLTLTGPVFT LWPAGQPTDT VTTTGGNAAA
TVATAGDKPV IGDMPAQTAP PTTANLNAWL NTFYAAEEKR KTTFPAQLPP DAQPFDLLVI
NICSLSWSDV EAAGLMSHPL WSHFDILFKH FNSGTSYSGP AAIRLLRASC GQPSHTRLYQ
PADNECYLFD NLAKLGFTQH LMMDHNGEFG GFLKEVRENG GMQSELMNQS GLPTALLSFD
GSPVYDDLAV LNRWLTGEER EANSRSATFF NLLPLHDGNH FPGVSKTADY KIRAQKLFDE
LDAFFTELEK SGRKVMVVVV PEHGGALKGD RMQISGLRDI PSPSITNVPA GVKFFGMKAP
HEGAPIDINQ PSSYLAISEL VVRAVDGKLF TEDSVNWNKL TSNLPQTAPV SENANAVVIQ
YQGKPYVRLN GGDWVPYPQ
|
|---|
| |