Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3864 |
Symbol | |
ID | 6483445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3738499 |
End bp | 3740541 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642739129 |
Product | oligopeptidase A |
Protein accession | YP_002042840 |
Protein GI | 194446166 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 92 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAATC CATTACTAAC GTCTTTTTCA CTGCCGCCTT TTTCTGCAAT TAAACCGGAG CATGTGGTGC CTGCGGTCAC CAAAGCGTTG GCCGATTGCC GGGCGGCGGT AGACGGCGTT GTGGCGCATG GCGCGCCGTA TAGCTGGGAA AACCTTTGCC AGCCGTTGGC GGAAGCCGAC GATGTTCTGG GGCGTATTTT CTCGCCAATT AGCCACTTAA ACTCGGTGAA AAATAGCCCG GAGCTGCGTG AAGCCTACGA ACAGACGCTG CCGCTGCTGT CGGAATACAG CACCTGGGTT GGCCAGCATG AAGGGTTGTA CAACGCGTAC CGCGACCTGC GCGACGGCGA TCATTACGCC ACTCTGAATA CCGCGCAGAA GAAAGCGGTT GATAACGCGC TACGTGATTT TGAACTGTCC GGCATCGGCC TGCCGAAAGA GAAACAGCAG CGTTACGGTG AAATCGCCAC TCGCCTGTCT GAGCTGGGCA ACCAGTACAG CAACAACGTG CTCGATGCCA CCATGGGCTG GACGAAGCTC ATCACCGACG AAGCCGAGCT GGCGGGAATG CCGGAAAGCG CTCTGGCGGC AGCAAAGGCC CAGGCGGAAG CCAAAGAGCA GGAAGGTTAC CTGCTGACTC TGGATATCCC GAGCTATCTG CCGGTCATGA CCTACTGCGA CAACCAGGCG TTGCGCGAAG AGATGTATCG CGCCTATTCC ACTCGCGCCT CCGACCAGGG GCCGAACGCC GGTAAGTGGG ATAACAGCCC GGTGATGGAA GAAATTCTTG CGCTGCGCCA TGAACTGGCG CAACTGCTGG GCTTCGAAAA TTATGCCCAT GAATCGCTGG CCACCAAAAT GGCGGAAAAT CCGCAGCAGG TGCTCGATTT CTTAACCGAT CTGGCGAAAC GCGCCCGTCC GCAGGGGGAA AAAGAGCTGG CCCAGCTGCG CGCCTTCGCC AAAGCCGAAT TTGGCGTTGA GGAACTGCAA CCGTGGGATA TCGCGTACTA CAGTGAAAAG CAAAAACAGC ACCTGTACAG CATCAGCGAT GAGCAGCTAC GTCCGTACTT CCCGGAAAAC AAAGCCGTGA ATGGCCTGTT TGAAGTGGTG AAACGTATTT ACGGCATCAC TGCCAAAGAG CGTACTGACG TTGATGTCTG GCACCCGGAA GTGCGTTTCT TTGAACTGTA TGACGAAAAT AACGAGCTGC GCGGAAGCTT CTACCTTGAC CTGTACGCGC GTGAACACAA ACGCGGCGGG GCGTGGATGG ACGACTGTGT CGGCCAGATG CGTAAGGCGG ACGGCACATT GCAAAAGCCG GTCGCTTATC TGACCTGTAA TTTCAACCGT CCGGTGAACG GTAAACCCGC TCTGTTTACC CATGACGAAG TGATCACCCT GTTCCACGAG TTTGGTCATG GCTTGCATCA TATGTTGACC CGCATTGAGA CCGCCGGGGT CTCCGGTATC AGCGGGGTGC CGTGGGATGC GGTCGAACTG CCGAGCCAGT TTATGGAAAA CTGGTGCTGG GAGCCGGAAG CGCTGGCGTT TATCTCCGGC CACTATGAAA CCGGCGAGCC GTTGCCGAAG GAACTGCTGG ATAAAATGCT GGCGGCGAAA AACTATCAGG CGGCGCTGTT TATTCTGCGT CAACTGGAGT TCGGTCTGTT TGATTTCCGT CTGCATGCGG AATTTAACCC GCAGCAAGGG GCGAAAATTC TTGAGACGCT CTTTGAAATC AAAAAACAGG TCGCCGTGGT GCCGTCACCG ACATGGGGCC GTTTCCCACA TGCGTTCAGC CATATCTTTG CTGGCGGCTA TGCGGCAGGC TACTACAGCT ATCTGTGGGC CGACGTACTG GCGGCGGACG CTTATTCCCG CTTTGAGGAG GAAGGCATTT TCAACCGTGA GACCGGTCAG TCGTTCCTTG ATAACATCCT GACTCGCGGT GGTTCTGAAG AGCCGATGGA ACTCTTTAAA CGCTTCCGTG GCCGTGAGCC ACAGCTGGAC GCGATGCTGG AGCATTACGG GATTAAAGGC TGA
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Protein sequence | MTNPLLTSFS LPPFSAIKPE HVVPAVTKAL ADCRAAVDGV VAHGAPYSWE NLCQPLAEAD DVLGRIFSPI SHLNSVKNSP ELREAYEQTL PLLSEYSTWV GQHEGLYNAY RDLRDGDHYA TLNTAQKKAV DNALRDFELS GIGLPKEKQQ RYGEIATRLS ELGNQYSNNV LDATMGWTKL ITDEAELAGM PESALAAAKA QAEAKEQEGY LLTLDIPSYL PVMTYCDNQA LREEMYRAYS TRASDQGPNA GKWDNSPVME EILALRHELA QLLGFENYAH ESLATKMAEN PQQVLDFLTD LAKRARPQGE KELAQLRAFA KAEFGVEELQ PWDIAYYSEK QKQHLYSISD EQLRPYFPEN KAVNGLFEVV KRIYGITAKE RTDVDVWHPE VRFFELYDEN NELRGSFYLD LYAREHKRGG AWMDDCVGQM RKADGTLQKP VAYLTCNFNR PVNGKPALFT HDEVITLFHE FGHGLHHMLT RIETAGVSGI SGVPWDAVEL PSQFMENWCW EPEALAFISG HYETGEPLPK ELLDKMLAAK NYQAALFILR QLEFGLFDFR LHAEFNPQQG AKILETLFEI KKQVAVVPSP TWGRFPHAFS HIFAGGYAAG YYSYLWADVL AADAYSRFEE EGIFNRETGQ SFLDNILTRG GSEEPMELFK RFRGREPQLD AMLEHYGIKG
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