Gene SNSL254_A3864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3864 
Symbol 
ID6483445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3738499 
End bp3740541 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content56% 
IMG OID642739129 
Productoligopeptidase A 
Protein accessionYP_002042840 
Protein GI194446166 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0339] Zn-dependent oligopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATC CATTACTAAC GTCTTTTTCA CTGCCGCCTT TTTCTGCAAT TAAACCGGAG 
CATGTGGTGC CTGCGGTCAC CAAAGCGTTG GCCGATTGCC GGGCGGCGGT AGACGGCGTT
GTGGCGCATG GCGCGCCGTA TAGCTGGGAA AACCTTTGCC AGCCGTTGGC GGAAGCCGAC
GATGTTCTGG GGCGTATTTT CTCGCCAATT AGCCACTTAA ACTCGGTGAA AAATAGCCCG
GAGCTGCGTG AAGCCTACGA ACAGACGCTG CCGCTGCTGT CGGAATACAG CACCTGGGTT
GGCCAGCATG AAGGGTTGTA CAACGCGTAC CGCGACCTGC GCGACGGCGA TCATTACGCC
ACTCTGAATA CCGCGCAGAA GAAAGCGGTT GATAACGCGC TACGTGATTT TGAACTGTCC
GGCATCGGCC TGCCGAAAGA GAAACAGCAG CGTTACGGTG AAATCGCCAC TCGCCTGTCT
GAGCTGGGCA ACCAGTACAG CAACAACGTG CTCGATGCCA CCATGGGCTG GACGAAGCTC
ATCACCGACG AAGCCGAGCT GGCGGGAATG CCGGAAAGCG CTCTGGCGGC AGCAAAGGCC
CAGGCGGAAG CCAAAGAGCA GGAAGGTTAC CTGCTGACTC TGGATATCCC GAGCTATCTG
CCGGTCATGA CCTACTGCGA CAACCAGGCG TTGCGCGAAG AGATGTATCG CGCCTATTCC
ACTCGCGCCT CCGACCAGGG GCCGAACGCC GGTAAGTGGG ATAACAGCCC GGTGATGGAA
GAAATTCTTG CGCTGCGCCA TGAACTGGCG CAACTGCTGG GCTTCGAAAA TTATGCCCAT
GAATCGCTGG CCACCAAAAT GGCGGAAAAT CCGCAGCAGG TGCTCGATTT CTTAACCGAT
CTGGCGAAAC GCGCCCGTCC GCAGGGGGAA AAAGAGCTGG CCCAGCTGCG CGCCTTCGCC
AAAGCCGAAT TTGGCGTTGA GGAACTGCAA CCGTGGGATA TCGCGTACTA CAGTGAAAAG
CAAAAACAGC ACCTGTACAG CATCAGCGAT GAGCAGCTAC GTCCGTACTT CCCGGAAAAC
AAAGCCGTGA ATGGCCTGTT TGAAGTGGTG AAACGTATTT ACGGCATCAC TGCCAAAGAG
CGTACTGACG TTGATGTCTG GCACCCGGAA GTGCGTTTCT TTGAACTGTA TGACGAAAAT
AACGAGCTGC GCGGAAGCTT CTACCTTGAC CTGTACGCGC GTGAACACAA ACGCGGCGGG
GCGTGGATGG ACGACTGTGT CGGCCAGATG CGTAAGGCGG ACGGCACATT GCAAAAGCCG
GTCGCTTATC TGACCTGTAA TTTCAACCGT CCGGTGAACG GTAAACCCGC TCTGTTTACC
CATGACGAAG TGATCACCCT GTTCCACGAG TTTGGTCATG GCTTGCATCA TATGTTGACC
CGCATTGAGA CCGCCGGGGT CTCCGGTATC AGCGGGGTGC CGTGGGATGC GGTCGAACTG
CCGAGCCAGT TTATGGAAAA CTGGTGCTGG GAGCCGGAAG CGCTGGCGTT TATCTCCGGC
CACTATGAAA CCGGCGAGCC GTTGCCGAAG GAACTGCTGG ATAAAATGCT GGCGGCGAAA
AACTATCAGG CGGCGCTGTT TATTCTGCGT CAACTGGAGT TCGGTCTGTT TGATTTCCGT
CTGCATGCGG AATTTAACCC GCAGCAAGGG GCGAAAATTC TTGAGACGCT CTTTGAAATC
AAAAAACAGG TCGCCGTGGT GCCGTCACCG ACATGGGGCC GTTTCCCACA TGCGTTCAGC
CATATCTTTG CTGGCGGCTA TGCGGCAGGC TACTACAGCT ATCTGTGGGC CGACGTACTG
GCGGCGGACG CTTATTCCCG CTTTGAGGAG GAAGGCATTT TCAACCGTGA GACCGGTCAG
TCGTTCCTTG ATAACATCCT GACTCGCGGT GGTTCTGAAG AGCCGATGGA ACTCTTTAAA
CGCTTCCGTG GCCGTGAGCC ACAGCTGGAC GCGATGCTGG AGCATTACGG GATTAAAGGC
TGA
 
Protein sequence
MTNPLLTSFS LPPFSAIKPE HVVPAVTKAL ADCRAAVDGV VAHGAPYSWE NLCQPLAEAD 
DVLGRIFSPI SHLNSVKNSP ELREAYEQTL PLLSEYSTWV GQHEGLYNAY RDLRDGDHYA
TLNTAQKKAV DNALRDFELS GIGLPKEKQQ RYGEIATRLS ELGNQYSNNV LDATMGWTKL
ITDEAELAGM PESALAAAKA QAEAKEQEGY LLTLDIPSYL PVMTYCDNQA LREEMYRAYS
TRASDQGPNA GKWDNSPVME EILALRHELA QLLGFENYAH ESLATKMAEN PQQVLDFLTD
LAKRARPQGE KELAQLRAFA KAEFGVEELQ PWDIAYYSEK QKQHLYSISD EQLRPYFPEN
KAVNGLFEVV KRIYGITAKE RTDVDVWHPE VRFFELYDEN NELRGSFYLD LYAREHKRGG
AWMDDCVGQM RKADGTLQKP VAYLTCNFNR PVNGKPALFT HDEVITLFHE FGHGLHHMLT
RIETAGVSGI SGVPWDAVEL PSQFMENWCW EPEALAFISG HYETGEPLPK ELLDKMLAAK
NYQAALFILR QLEFGLFDFR LHAEFNPQQG AKILETLFEI KKQVAVVPSP TWGRFPHAFS
HIFAGGYAAG YYSYLWADVL AADAYSRFEE EGIFNRETGQ SFLDNILTRG GSEEPMELFK
RFRGREPQLD AMLEHYGIKG