Gene SNSL254_A3851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3851 
Symbol 
ID6485408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3724127 
End bp3725176 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content51% 
IMG OID642739116 
Productinner membrane protein YhhT 
Protein accessionYP_002042827 
Protein GI194444171 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCG CTCAACCCGA CAAAACGGGT ATGCATATTC TGCTGAAACT GGCCTCCCTG 
GTTATTATTC TCGCCGGGAT TCATGCCGCG GCGGATATTA TTGTACAACT CTTGCTGGCG
CTCTTTTTCG CCATTGTTCT TAATCCATTA GTGACCTGGT TTATTCGTCG GGGCGTGAAG
CGACCACTGG CGATTACTAT CGTGGTGGTC GTCATGCTGA TCGTGCTTAC CGCGCTGGTG
GGTGTACTTG CCGCATCGCT TAATGAATTT ATCGCTATGC TGCCTAAATA CAGCAAGGAG
CTGACGCGTA AAGTCTTACA CCTTCAGGAG TTAATGCCCT TCCTGAATTT ACATATGTCG
CCGGAACGTA TGCTCCGCGG GATGGATTCC GATAAAATCA TGCTCTTCAC CACAACATTA
ATGACCGGCG TATCGGGCGC GATGGCAAGC ATTGTGCTGC TGGTGATGAC CGTGGTTTTT
ATGCTATTTG AGGTGCGCCA CGTGCCTTAT AAATTACGTT TCGCGCTAAA CAATCCACAA
ATTCATATTG CCGGCCTGCA CCGCGCCCTG AAAGGCGTCT CGCATTATCT GGCGCTGAAA
ACGCTGCTCA GTTTATGGAC GGGCGCGATT ATCTGGCTGG GGCTGGCGTT AATGGGTATT
CAGTTTGCGC TAATGTGGGG CGTACTGGCC TTTTTGCTCA ATTACGTTCC TAATATCGGC
TCGGTGATTT CCGCCGTTCC CCCCATGATT CAGGCGCTGT TATTTAACGG TTTTTACGAG
TGCGTACTGG TCGGCGCGCT CTTTTTGGTG GTCCATATGG TGATTGGCAA CATTATGGAG
CCACGCATGA TGGGCCATCG TCTGGGAATG TCCACGCTGG TGGTATTTCT TTCGTTATTG
GTCTGGGGAT GGCTATTAGG CCCGGTCGGG ATGCTCTTGT CTGTTCCTTT GACCAGCGTC
TGCAAAATCT GGATGGAAAC CACTAAAGGC GGCAGCAAAC TGGCGATCTT ACTGGGGCCA
GGCCGACCGA AAAGCCGTTT ACCGGGATGA
 
Protein sequence
MATAQPDKTG MHILLKLASL VIILAGIHAA ADIIVQLLLA LFFAIVLNPL VTWFIRRGVK 
RPLAITIVVV VMLIVLTALV GVLAASLNEF IAMLPKYSKE LTRKVLHLQE LMPFLNLHMS
PERMLRGMDS DKIMLFTTTL MTGVSGAMAS IVLLVMTVVF MLFEVRHVPY KLRFALNNPQ
IHIAGLHRAL KGVSHYLALK TLLSLWTGAI IWLGLALMGI QFALMWGVLA FLLNYVPNIG
SVISAVPPMI QALLFNGFYE CVLVGALFLV VHMVIGNIME PRMMGHRLGM STLVVFLSLL
VWGWLLGPVG MLLSVPLTSV CKIWMETTKG GSKLAILLGP GRPKSRLPG