Gene SNSL254_A3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3848 
Symbol 
ID6484623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3721479 
End bp3722144 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content51% 
IMG OID642739113 
Producthypothetical protein 
Protein accessionYP_002042824 
Protein GI194444110 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCGT TTACACAATC ACAGCGCGTA AAAGCGTTGT TCTGGCTATC GCTATTCCAT 
TTACTGGTGA TCATTTCCAG TAACTATCTG GTGCAGCTCC CCATCACTAT TTTTGGTTTC
CACACGACCT GGGGCGCGTT TAGTTTTCCT TTTATTTTTC TCGCCACCGA TCTTACCGTG
CGTATTTTTG GCGCACCGCT GGCGCGCCGC ATTATCTTCG CCGTCATGAT CCCCGCGCTG
CTGGTGTCGT ATGTGGTGTC ATCGCTGTTC TATATGGGCG CCTGGCAAGG TTTCGCCGCG
CTGGCGAACT TTAATCTGTT TGTCGCCCGT ATCGCCGCCG CCAGCTTTAT GGCCTACGCG
CTGGGACAGA TCCTTGATGT CCATGTGTTT AACCGCCTGC GCCAAAATCG TCGCTGGTGG
CTGGCGCCGA CCGCTTCAAC GCTGTTTGGC AATATCAGCG ATACCCTTGC CTTTTTCTTC
ATTGCGTTCT GGCGAAGCCC CGATGCGTTT ATGGCCGAAC ACTGGATGGA AATTGCGCTG
GTGGATTATT GCTTTAAGGT GCTCATCAGC ATTATTTTCT TCCTGCCGAT GTACGGCGTT
CTACTGAATA TGTTGCTGAA AAAGCTGGCA GATAAATCTG AAATTTCCCC ATTACCGGCA
AGTTAA
 
Protein sequence
MTPFTQSQRV KALFWLSLFH LLVIISSNYL VQLPITIFGF HTTWGAFSFP FIFLATDLTV 
RIFGAPLARR IIFAVMIPAL LVSYVVSSLF YMGAWQGFAA LANFNLFVAR IAAASFMAYA
LGQILDVHVF NRLRQNRRWW LAPTASTLFG NISDTLAFFF IAFWRSPDAF MAEHWMEIAL
VDYCFKVLIS IIFFLPMYGV LLNMLLKKLA DKSEISPLPA S