Gene SNSL254_A3844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3844 
Symbol 
ID6483535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp3716292 
End bp3716918 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content58% 
IMG OID642739109 
Producthypothetical protein 
Protein accessionYP_002042820 
Protein GI194445374 
COG category[S] Function unknown 
COG ID[COG3714] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.996869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTGGT CGTTTATCGC TGTCTGCCTG TCCGCATGGC TGTATGTGGA CGCCTCCTAT 
CGCGGGCCAG CCTGGCAACG CTGGGTTTTT AAGCCCGTCA CGTTATTACT GTTGCTGTTA 
CTGGCCTGGC AAGCGCCGAT GTTTGACGCC ATCAGTTATC TTGTGTTGGC CGGACTGTGC 
GCCTCGCTGG TCGGCGATGC GTTAACGCTC TTGCCGCGTC AACGCCTGCT GTACGCCGTC 
GGGGCATTTT TCTTATCGCA TCTGCTCTAC ACCATTTACT TTGCCAGCCA AATGACGTTG 
TCGTTCTTCT GGCCGCTGCC GCTGGCGTTA CTGATAGTCG GCGCGTTGCT TATCGCCGTT 
ATCTGGACGC GACTGGAGGA GCTACGCTGG CCGGTATGTA CTTTTATCGC CATGACGCTG 
GTCATGGTCT GGCTGGCGGG CGAACTGTGG TTCTTCCGTC CAACGGCGCC AGCCCTTTCG 
GCCTTTACCG GCGCGACGCT GCTGTTTATC GGCAATATCG TCTGGCTGGG TAGCCATTAC 
CGCCGCCGTT TCCGGGCGGA TAACGCAATT GCCGCCGCCT GCTACTTTGC CGGACACTTC 
CTGATTGTTC GCTCGCTGTA CCTGTAA
 
Protein sequence
MLWSFIAVCL SAWLYVDASY RGPAWQRWVF KPVTLLLLLL LAWQAPMFDA ISYLVLAGLC 
ASLVGDALTL LPRQRLLYAV GAFFLSHLLY TIYFASQMTL SFFWPLPLAL LIVGALLIAV 
IWTRLEELRW PVCTFIAMTL VMVWLAGELW FFRPTAPALS AFTGATLLFI GNIVWLGSHY 
RRRFRADNAI AAACYFAGHF LIVRSLYL