Gene SNSL254_A3842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3842 
Symbol 
ID6485376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp3715488 
End bp3715757 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content48% 
IMG OID642739107 
Producthypothetical protein 
Protein accessionYP_002042818 
Protein GI194444665 
COG category[S] Function unknown 
COG ID[COG3776] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTA ATCTGGGCCG CTTATTAATG CTCTTCGTGT GGGCATTTTT GATTCTTAAT 
CTGGTGCATC CCTTCCCGCG CCCGCTCAAT ATCTTCGTCA ACGTGGCGTT GGTGTTCATG 
GCGCTGATGC ACGGTATGCA ACTGGCGCTG CTGAAATCAA CGATACCGAA AGAGGGTCCG 
CAGATGACGA CGGGAGAAAA AATCCGCATT TTCCTGTTCG GCGTGTTTGA GCTGCTGGTC 
TGGCAGAAGA AGTTTAAGAA CAAAAAATAA
 
Protein sequence
MLINLGRLLM LFVWAFLILN LVHPFPRPLN IFVNVALVFM ALMHGMQLAL LKSTIPKEGP 
QMTTGEKIRI FLFGVFELLV WQKKFKNKK