| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3831 |
|---|
| Symbol | livM |
|---|
| ID | 6485357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 3704687 |
|---|
| End bp | 3705964 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642739096 |
|---|
| Product | leucine/isoleucine/valine transporter permease subunit |
|---|
| Protein accession | YP_002042807 |
|---|
| Protein GI | 194443944 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 102 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGA TGCATATTGC GATGGCTCTG TTCTCTGCGG CGATGTTCTT CGTTTTGGCT
GGCGTCTTCA TGGGCGTACA ACTGGAGCTG GACGGCACCA AACTGGTGGT GGATACCGCC
GCCGACATCC GCTGGCAGTG GATCTTTATC GGTACGGCAG TGGTTTTTTT CTTTCAGTTG
CTGCGTCCGA TGTTCCAGAA AGCGGTGAAG CACGTCTCCG GACCGAAGTT TATTCTGCCG
GCGATCGATG GCTCTACCGT TAAGCAAAAG CTGTTTCTGA TGGCGCTGCT GGTTATCGCC
GTGGCGTGGC CGTTTATGGT GTCGCGCGGT AGCGTCGATA TCGCCACTAT GACCATGATT
TATATCATCC TCGGTCTGGG GCTGAACGTG GTGGTGGGGC TGTCCGGCCT GCTGGTATTG
GGCTACGGCG GCTTTTACGC CATCGGCGCT TATACCTTTG CGCTGCTCAA CCACTATTAT
GGTTTGGGTT TCTGGACCTG CCTGCCGCTG GCGGGACTGG TCTCCGCCGC TGCTGGTTTC
CTGCTCGGCT TCCCGGTACT GCGTCTGCGC GGCGACTATC TGGCGATTGT GACGCTCGGC
TTCGGCGAAA TCGTCCGTAT CCTGCTGCTC AACAACACGG AAATTACCGG CGGCCCGAAC
GGCATCAGCC AGATCCCGAA ACCGACGCTG TTTGGTCTGG AGTTTAGCCG CAGCACCCGC
GAAGGCGGCT GGGATACCTT CAGCAATTTC TTTGGCGTGA AGTACGACCC ATCCGACCGG
GTCATTTTCC TCTATCTGGT GGCCCTGTTG CTGGTGGTCC TGTCGCTGTT TGTCATTAAC
CGCCTGCTGC GTATGCCGCT GGGCCGGGCG TGGGAAGCGT TGCGTGAAGA TGAGATCGCC
TGTCGCTCAT TAGGTTTAAG CCCGACGCGC ATCAAGCTGA CCGCTTTTAC TATCAGCGCC
GCGTTTGCCG GTTTCGCCGG GACGTTGTTT GCCGCCCGCC AGGGCTTTGT CAGCCCGGAA
TCCTTCACCT TCGCCGAATC CGCCTTCGTG CTGGCGATTG TGGTGCTGGG CGGAATGGGC
TCGCAGTTTG CGGTGATCCT GGCGGCGGTT CTGCTGGTGG TGTCGCGCGA GTTGATGCGC
GATTTCAACG AATACAGCAT GTTGATGCTC GGCGGTTTGA TGGTGTTGAT GATGATCTGG
CGCCCGCAGG GATTGCTGCC GATGACGCGT CCGCAGTTGA AGCTGAAAAG TGGTCAGGCG
AAAGGAGAGC AGGCATGA
|
|---|
| Protein sequence | MKPMHIAMAL FSAAMFFVLA GVFMGVQLEL DGTKLVVDTA ADIRWQWIFI GTAVVFFFQL
LRPMFQKAVK HVSGPKFILP AIDGSTVKQK LFLMALLVIA VAWPFMVSRG SVDIATMTMI
YIILGLGLNV VVGLSGLLVL GYGGFYAIGA YTFALLNHYY GLGFWTCLPL AGLVSAAAGF
LLGFPVLRLR GDYLAIVTLG FGEIVRILLL NNTEITGGPN GISQIPKPTL FGLEFSRSTR
EGGWDTFSNF FGVKYDPSDR VIFLYLVALL LVVLSLFVIN RLLRMPLGRA WEALREDEIA
CRSLGLSPTR IKLTAFTISA AFAGFAGTLF AARQGFVSPE SFTFAESAFV LAIVVLGGMG
SQFAVILAAV LLVVSRELMR DFNEYSMLML GGLMVLMMIW RPQGLLPMTR PQLKLKSGQA
KGEQA
|
|---|
| |