| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3825 |
|---|
| Symbol | ugpA |
|---|
| ID | 6486189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 3699923 |
|---|
| End bp | 3700810 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642739090 |
|---|
| Product | glycerol-3-phosphate transporter permease |
|---|
| Protein accession | YP_002042801 |
|---|
| Protein GI | 194446760 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 101 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCAT CCCGTCCGGT GTTCCGCTCG CGCTGGCTGC CGTATTTACT GGTTGCTCCG
CAGTTGGTTA TCACCGTTAT TTTCTTTATC TGGCCTGCGG GCGAAGCGCT GTGGTATTCG
CTGCAAAGCG TCGATCCGTT TGGTTTTTCC AGCCAATTTG TCGGGCTGGA GAATTTCGTC
GCGCTTTTTC ACGACAGTTA TTATCTCGAT GCCTTCTGGA CGACGATTAA ATTCAGCGCG
CTGGTCACGT TTAGCGGCCT GCTGGTCTCG TTGTTTTTCG CCGCCCTGGT GGATTACGTG
GTGCGCGGCA GCCGTTTTTA TCAGACGCTG ATGCTGCTGC CTTATGCCGT CGCGCCCGCC
GTCGCCGCCG TATTGTGGAT TTTCCTGTTT AACCCGGGGC GGGGATTAAT CACCCATTTC
CTTGGCGAAT TCGGCTATGA CTGGAACCAC GCGCAAAACA GCGGTCAGGC GATGTTCCTG
GTGGTATTTG CGTCAGTCTG GAAGCAGATT AGTTACAACT TTTTATTCTT CTTTGCCGCG
CTGCAATCCA TTCCCCGCTC GCTGGTGGAA GCGGCGGCCA TTGACGGCGC CGGGCCGATT
CGTCGTTTCT TCCGGCTTTC TTTGCCGCTT ATTGCGCCGG TCAGTTTCTT CCTGCTGGTG
GTCAACCTGG TGTACGCCTT TTTCGACACC TTCCCGGTGA TCGACGCCGC GACCGCCGGC
GGGCCGGTAC AAGCCACCAC GACGCTGATT TATAAGATCT ATCGCGAAGG GTTTACCGGC
CTGGATCTCT CGGCGTCCGC CGCGCAGTCG GTGGTGTTGA TGTTCCTCGT CATCATTCTG
ACGGTGGTGC AGTTCCGCTA TGTGGAAAGT AAGGTGCGTT ACCAATGA
|
|---|
| Protein sequence | MSSSRPVFRS RWLPYLLVAP QLVITVIFFI WPAGEALWYS LQSVDPFGFS SQFVGLENFV
ALFHDSYYLD AFWTTIKFSA LVTFSGLLVS LFFAALVDYV VRGSRFYQTL MLLPYAVAPA
VAAVLWIFLF NPGRGLITHF LGEFGYDWNH AQNSGQAMFL VVFASVWKQI SYNFLFFFAA
LQSIPRSLVE AAAIDGAGPI RRFFRLSLPL IAPVSFFLLV VNLVYAFFDT FPVIDAATAG
GPVQATTTLI YKIYREGFTG LDLSASAAQS VVLMFLVIIL TVVQFRYVES KVRYQ
|
|---|
| |