Gene SNSL254_A3824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3824 
Symbol 
ID6485552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3699081 
End bp3699926 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content53% 
IMG OID642739089 
Productglycerol-3-phosphate transporter membrane protein 
Protein accessionYP_002042800 
Protein GI194446126 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones103 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAGA ATCGTCGCGG GCTGACAATA TTCAGCCATA CCATGCTGAT TCTGGGGATC 
GCGGTCATTT TGTTTCCGCT GTATGTCGCG TTTGTCGCGG CGACGCTGGA CGACCGCGCG
GTGTTTGAGA CGCCGATGAC GCTGCTTCCC GGCACGCAGT TACTGGAGAA TATCAAAACT
ATTTGGGTCA ACGGCGTCGG TGTTAATAGC GCGCCATTCT GGCTGATGAT GCTTAACAGT
TTCATTATGG CGTTCAGCAT TACGGTAGGC AAAATCACGG TATCTATGCT TTCCGCATTC
GCCATCGTCT GGTTTCGTTT TCCCCTGCGT AACCTGTTCT TCTGGATGAT TTTTATCACC
CTGATGCTGC CGGTTGAAGT GCGTATCTTC CCGACGGTGG AAGTGATCGC CAACCTGAAA
ATGCTCGACA GCTATGCTGG TCTGACGCTA CCGCTGATGG CGTCCGCTAC CGCCACTTTC
CTGTTTCGTC AGTTCTTCAT GACGCTTCCG GATGAACTGG TGGAGGCGGC CCGTATTGAC
GGCGCGTCGC CGATGCGCTT TTTCCGCGAC ATCGTGTTGC CGCTGTCAAA AACCAACCTG
GCGGCGTTAT TCGTCATCAC CTTTATCTAC GGCTGGAACC AGTATCTGTG GCCGCTGTTG
ATTATCACCG ACGTGAATCT TGGCACTGCC GTAGCGGGTA TCAAAGGGAT GATCGCCACC
GGCGAAGGTA CCACGCAATG GAACCAGGTG ATGGCGGCAA TGCTGCTCAC CCTTATCCCT
CCGGTCGTTA TCGTTTTAGC CATGCAACGG GCGTTTGTGC GTGGTTTAGT GGACAGTGAG
AAATAA
 
Protein sequence
MIENRRGLTI FSHTMLILGI AVILFPLYVA FVAATLDDRA VFETPMTLLP GTQLLENIKT 
IWVNGVGVNS APFWLMMLNS FIMAFSITVG KITVSMLSAF AIVWFRFPLR NLFFWMIFIT
LMLPVEVRIF PTVEVIANLK MLDSYAGLTL PLMASATATF LFRQFFMTLP DELVEAARID
GASPMRFFRD IVLPLSKTNL AALFVITFIY GWNQYLWPLL IITDVNLGTA VAGIKGMIAT
GEGTTQWNQV MAAMLLTLIP PVVIVLAMQR AFVRGLVDSE K