Gene SNSL254_A3817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3817 
Symbol 
ID6485897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp3692112 
End bp3692873 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content43% 
IMG OID642739082 
Producthypothetical protein 
Protein accessionYP_002042793 
Protein GI194445340 
COG category[S] Function unknown 
COG ID[COG5426] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones108 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATA CGCAGAAAAA ACTAAAGGTG CTCTTTATTG GAGAATCCTG GCATATTCAT 
ATGATTCATT CAAAAGGTTA TGACAGTTTC ACCTCCAGTA AATATGAAGA AGGCGCCACA 
TGGTTACTGG AATGCTTGAG GAAGGGCGGC GTTGATATTG ATTACATGCC TGCCCACACG 
GTACAAATTG CCTTTCCAGA GAGTATTGAC GAATTAAACC GTTACGATGT GATTGTTATT 
AGCGACATTG GTAGTAATAC CTTCCTGTTG CAAAACGAGA CATTTTATCA GCTAAAAATA 
AAACCAAACG CTCTGGAGTC TATTAAAGAG TACGTCAAAA ATGGCGGTGG ACTACTCATG 
ATTGGCGGTT ATCTGTCATT CATGGGTATT GAGGCAAAAG CCAATTATAA GAACACCGTT 
CTTGCTGAGG TTCTGCCAGT TATTATGCTT GATGGCGATG ACCGGGTAGA AAAGCCCGAG 
GGTATCTGTG CTGAGGCTGT CTCACCTGAA CATCCTGTTG TTAACGGGTT CTCAGATTAC 
CCGGTATTTC TTGGATATAA CCAGGCCGTC GCCAGAGACG ATGCCGATGT CGTATTAACA 
ATAAATAATG ACCCATTGTT AGTGTTCGGT GAATACCAAC AGGGTAAAAC CGCCTGCTTT 
ATGAGTGACT GCTCCCCACA CTGGGGAACC CAGCAGTTTA TGTCATGGCC ATTTTATACC 
GACCTGTGGG TCAACACGCT TCAATTCATC GCCAGAAAAT AA
 
Protein sequence
MNNTQKKLKV LFIGESWHIH MIHSKGYDSF TSSKYEEGAT WLLECLRKGG VDIDYMPAHT 
VQIAFPESID ELNRYDVIVI SDIGSNTFLL QNETFYQLKI KPNALESIKE YVKNGGGLLM 
IGGYLSFMGI EAKANYKNTV LAEVLPVIML DGDDRVEKPE GICAEAVSPE HPVVNGFSDY 
PVFLGYNQAV ARDDADVVLT INNDPLLVFG EYQQGKTACF MSDCSPHWGT QQFMSWPFYT 
DLWVNTLQFI ARK