Gene SNSL254_A3812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3812 
Symbol 
ID6483394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3688624 
End bp3689661 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content50% 
IMG OID642739078 
Productputative dehydrogenase 
Protein accessionYP_002042789 
Protein GI194442749 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones110 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTAC ACTGCGCATT TATTGGATTC GGCAAAAGTA CCACCCGTTA CCATCTCCCC 
TATGTTCTGA ATCGTAAAGA TACCTGGCAT GTCGCGCATA TTTTCCGTCG TCACGCTAAA
CCGGAAGAGC AGGCGCCACA GTATTCACAT ATTCACTTCA CCAACGATCT GGATGAGGTG
TTGGGCGATC CGCAGGTAAA GCTGGTGATC GTCTGTACGC ATGCTGACAG CCATTTCGAA
TACGCCAAAC GCGCGCTGGA AGCGGGTAAA AATGTGCTGG TTGAGAAACC TTTCACGCCG
ACGCTGGCGG AGGCAAAAGT GTTGTTCGAC CTGGCGCGAA GCAAAGGACT GACCGTCACG
CCATATCAGA ATCGGCGTTT TGATTCCTGT TTTCTCACTG CTAAAAAAGC GATAGAGAGC
GGGAAACTGG GCAAGATTGT CGAAATTGAA AGCCATTTCG ATTATTACCG CCCGGTAGCA
GAAACCAAAC CGGGCCTGCC GCAGGACGGC GCATTCTATG GACTTGGCGT CCACACTATG
GATCAAATTA TTTCGCTATT TGGCCGCCCG GATCATGTCG CGTATGACAT TCGTAGCCTG
CGTAATAAAG CGAATCCGGA TGACACCTTT GAAGCGCAAC TGTTTTATGG CGATTTGAAG
GCTATCGTTA AAACCAGCCA TCTGGTGAAA ATCGACTATC CGAAGTTTAT TGTTCACGGC
ACCAAAGGTT CGTTTGTGAA ATACGGTATC GATCAACAAG AAACCAGCCT GAAAGCGAAC
ATTATGCCTG GCGAACCCGG TTTCGCCGCT GACGAATCCG TCGGTGTGCT GGAGTATGTC
AATGACGACG GCGTTACGGT GAAAGAAGAG GTGAAACCGG AAACGGGTGA CTATGGTCGT
GTTTATGATG CGCTGTACCA GACGTTGACC GTCGGTACGC CTAATTACGT CAAGGAATCT
GAAGTTCTTA CCAACCTGGA AATCCTCGAA CGTGCCTTCG AACAGGCAAC GCCTGCGACG
ATAACCTTGG CTAAATAG
 
Protein sequence
MTLHCAFIGF GKSTTRYHLP YVLNRKDTWH VAHIFRRHAK PEEQAPQYSH IHFTNDLDEV 
LGDPQVKLVI VCTHADSHFE YAKRALEAGK NVLVEKPFTP TLAEAKVLFD LARSKGLTVT
PYQNRRFDSC FLTAKKAIES GKLGKIVEIE SHFDYYRPVA ETKPGLPQDG AFYGLGVHTM
DQIISLFGRP DHVAYDIRSL RNKANPDDTF EAQLFYGDLK AIVKTSHLVK IDYPKFIVHG
TKGSFVKYGI DQQETSLKAN IMPGEPGFAA DESVGVLEYV NDDGVTVKEE VKPETGDYGR
VYDALYQTLT VGTPNYVKES EVLTNLEILE RAFEQATPAT ITLAK