Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3812 |
Symbol | |
ID | 6483394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3688624 |
End bp | 3689661 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642739078 |
Product | putative dehydrogenase |
Protein accession | YP_002042789 |
Protein GI | 194442749 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 110 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTAC ACTGCGCATT TATTGGATTC GGCAAAAGTA CCACCCGTTA CCATCTCCCC TATGTTCTGA ATCGTAAAGA TACCTGGCAT GTCGCGCATA TTTTCCGTCG TCACGCTAAA CCGGAAGAGC AGGCGCCACA GTATTCACAT ATTCACTTCA CCAACGATCT GGATGAGGTG TTGGGCGATC CGCAGGTAAA GCTGGTGATC GTCTGTACGC ATGCTGACAG CCATTTCGAA TACGCCAAAC GCGCGCTGGA AGCGGGTAAA AATGTGCTGG TTGAGAAACC TTTCACGCCG ACGCTGGCGG AGGCAAAAGT GTTGTTCGAC CTGGCGCGAA GCAAAGGACT GACCGTCACG CCATATCAGA ATCGGCGTTT TGATTCCTGT TTTCTCACTG CTAAAAAAGC GATAGAGAGC GGGAAACTGG GCAAGATTGT CGAAATTGAA AGCCATTTCG ATTATTACCG CCCGGTAGCA GAAACCAAAC CGGGCCTGCC GCAGGACGGC GCATTCTATG GACTTGGCGT CCACACTATG GATCAAATTA TTTCGCTATT TGGCCGCCCG GATCATGTCG CGTATGACAT TCGTAGCCTG CGTAATAAAG CGAATCCGGA TGACACCTTT GAAGCGCAAC TGTTTTATGG CGATTTGAAG GCTATCGTTA AAACCAGCCA TCTGGTGAAA ATCGACTATC CGAAGTTTAT TGTTCACGGC ACCAAAGGTT CGTTTGTGAA ATACGGTATC GATCAACAAG AAACCAGCCT GAAAGCGAAC ATTATGCCTG GCGAACCCGG TTTCGCCGCT GACGAATCCG TCGGTGTGCT GGAGTATGTC AATGACGACG GCGTTACGGT GAAAGAAGAG GTGAAACCGG AAACGGGTGA CTATGGTCGT GTTTATGATG CGCTGTACCA GACGTTGACC GTCGGTACGC CTAATTACGT CAAGGAATCT GAAGTTCTTA CCAACCTGGA AATCCTCGAA CGTGCCTTCG AACAGGCAAC GCCTGCGACG ATAACCTTGG CTAAATAG
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Protein sequence | MTLHCAFIGF GKSTTRYHLP YVLNRKDTWH VAHIFRRHAK PEEQAPQYSH IHFTNDLDEV LGDPQVKLVI VCTHADSHFE YAKRALEAGK NVLVEKPFTP TLAEAKVLFD LARSKGLTVT PYQNRRFDSC FLTAKKAIES GKLGKIVEIE SHFDYYRPVA ETKPGLPQDG AFYGLGVHTM DQIISLFGRP DHVAYDIRSL RNKANPDDTF EAQLFYGDLK AIVKTSHLVK IDYPKFIVHG TKGSFVKYGI DQQETSLKAN IMPGEPGFAA DESVGVLEYV NDDGVTVKEE VKPETGDYGR VYDALYQTLT VGTPNYVKES EVLTNLEILE RAFEQATPAT ITLAK
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