Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3806 |
Symbol | asd |
ID | 6483574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3683142 |
End bp | 3684248 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642739073 |
Product | aspartate-semialdehyde dehydrogenase |
Protein accession | YP_002042784 |
Protein GI | 194442883 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 106 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATG TTGGTTTTAT CGGCTGGCGC GGAATGGTCG GCTCTGTTCT CATGCAACGC ATGGTAGAGG AGCGCGATTT CGACGCTATT CGCCCTGTTT TCTTTTCTAC CTCCCAGTTT GGACAGGCGG CGCCCACCTT CGGCGACACC TCCACCGGCA CGCTACAGGA CGCTTTTGAT CTGGATGCGC TAAAAGCGCT CGATATCATC GTGACCTGCC AGGGCGGCGA TTATACCAAC GAAATTTATC CAAAGCTGCG CGAAAGCGGA TGGCAGGGTT ACTGGATTGA CGCGGCTTCT ACGCTGCGCA TGAAAGATGA TGCCATTATT ATTCTCGACC CGGTCAACCA GGACGTGATT ACCGACGGCC TGAATAATGG CGTGAAGACC TTTGTGGGCG GTAACTGTAC CGTTAGCCTG ATGTTGATGT CGCTGGGCGG TCTCTTTGCC CATAATCTCG TTGACTGGGT ATCCGTCGCG ACCTATCAGG CCGCCTCCGG CGGCGGCGCG CGCCATATGC GCGAGCTGTT AACCCAGATG GGTCAGTTGT ATGGCCATGT CGCCGATGAA CTGGCGACGC CGTCTTCCGC AATTCTTGAT ATTGAACGCA AAGTTACGGC ATTGACCCGC AGCGGCGAGC TGCCGGTTGA TAACTTTGGC GTACCGCTGG CGGGAAGCCT GATCCCCTGG ATCGACAAAC AGCTCGATAA CGGCCAGAGC CGCGAAGAGT GGAAAGGCCA GGCGGAAACC AACAAGATTC TCAATACTGC CTCTGTGATT CCGGTTGATG GTTTGTGCGT GCGCGTCGGC GCGCTGCGCT GTCACAGCCA GGCGTTCACC ATCAAGCTGA AAAAAGAGGT ATCCATTCCG ACGGTGGAAG AACTGCTGGC GGCACATAAT CCGTGGGCGA AAGTGGTGCC GAACGATCGT GATATCACTA TGCGCGAATT AACCCCGGCG GCGGTGACCG GCACGTTGAC TACGCCGGTT GGTCGTCTGC GTAAGCTGAA CATGGGGCCA GAGTTCTTGT CGGCGTTTAC CGTAGGCGAC CAGTTGTTAT GGGGCGCCGC CGAGCCGCTG CGTCGAATGC TGCGCCAGTT GGCGTAG
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Protein sequence | MKNVGFIGWR GMVGSVLMQR MVEERDFDAI RPVFFSTSQF GQAAPTFGDT STGTLQDAFD LDALKALDII VTCQGGDYTN EIYPKLRESG WQGYWIDAAS TLRMKDDAII ILDPVNQDVI TDGLNNGVKT FVGGNCTVSL MLMSLGGLFA HNLVDWVSVA TYQAASGGGA RHMRELLTQM GQLYGHVADE LATPSSAILD IERKVTALTR SGELPVDNFG VPLAGSLIPW IDKQLDNGQS REEWKGQAET NKILNTASVI PVDGLCVRVG ALRCHSQAFT IKLKKEVSIP TVEELLAAHN PWAKVVPNDR DITMRELTPA AVTGTLTTPV GRLRKLNMGP EFLSAFTVGD QLLWGAAEPL RRMLRQLA
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