| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3800 |
|---|
| Symbol | |
|---|
| ID | 6484947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 3672493 |
|---|
| End bp | 3673248 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642739067 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_002042778 |
|---|
| Protein GI | 194443368 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 125 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TTACGACATC TATTCCGGCT CTCGATAAAA TTATGCGCGT ATTTGCTTAC
CTTCTGGAGT GCGATGGCGC AACGTTTACC CAGATCCATC AAAATTCAGG GATTGCGAAA
AGCAGTACCT CATCTTTGCT CAACGGCATG GTGGAGCATG GGTTATTACG CCAGGAAAAA
GACAAGTATT ATCTGGGGCT ACGCCTGTAT GAATTAGGTA ATAAAGCGGC GGAACAGTAT
GACATTAAAA AAATCGCGTT ACCGATTCTT GAAGAGATTC GCGATAACAC CGGCCTGACC
TGCCATCTTG GCGTTCTGGA GGGCGATGCC CCCATTTATC TTCTGAAAGT CGAAAGCCCA
CAGGCTATTG TGATTCGAAG CTGGGAGGGC AAGCGCCTCT CATTACATAG CTCAGGGCTG
GGGAAGGTGC TGATTGCATG GCTTAGCGGG GAAGAGCTGG AGGAGTTGCT GCCTCCAGAT
CAGATATTAA CGCGTTTTAC GGATACGACG ATCACGGATG TGAATATCCT TAAGCAGGAG
TTAGCAGGAA TTCGCCGTCG CGGCTGGGGT TATGATAATG AAGAAGACTC CCTTGGCGTG
CGCTGCATTG CGGTGCCGGT ATTCAATACG CAGGGGAAAG TGATCGCCGC CCTGAGCGTA
TCCGGCGTTA CGTTCCAGAT CCCCGATGAT AAACGCGAGT CGCTTGCTAC GCTGATGATG
GATGCCAGCC GTAGCCTGAC GCGTCTGATG TGCTGA
|
|---|
| Protein sequence | MKKITTSIPA LDKIMRVFAY LLECDGATFT QIHQNSGIAK SSTSSLLNGM VEHGLLRQEK
DKYYLGLRLY ELGNKAAEQY DIKKIALPIL EEIRDNTGLT CHLGVLEGDA PIYLLKVESP
QAIVIRSWEG KRLSLHSSGL GKVLIAWLSG EELEELLPPD QILTRFTDTT ITDVNILKQE
LAGIRRRGWG YDNEEDSLGV RCIAVPVFNT QGKVIAALSV SGVTFQIPDD KRESLATLMM
DASRSLTRLM C
|
|---|
| |