Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3797 |
Symbol | |
ID | 6483803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3668454 |
End bp | 3669788 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642739064 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002042775 |
Protein GI | 194445088 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.653013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 113 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGCA TTGAAATAGA GAAACCGACC ACACGAGGGC GCTGGCTGCA TATTATTCCA GCCACGATCC TCGTTTATAT CGTGGCCTAT ATGGACAGGA CCAATATCGC CATTGGGATC GCAGGCGGCA TGGATGAAGA TTTAGGCATG ACGGCTTCTT TTGCCGGTCT GGTCGCCGGG ATCTTCTTTA TTGGTTATAT CTTCCTGCAA ATTCCCGGCG GTCAGATAGC CGAGCGGCTA AGCGCCAAAA AGTTAATTGC CTGGACAATC GTCGCCTGGG GTGGCTTTGC CCTGCTGACC GGTTTTGTTC AGACACCGAC GCAGTTGTTG ATTATCCGCT TTGTGCTCGG CGTGGCGGAA GGTGCTGTGT ATCCCGCCAT TCTGGCGCTG ATTGGCCACT GGTTCCCAAA TGAGGAGCGC GCCAGGGCTA TCGCCTATTT CCAGATGAAC CTGGCCGTCG CTTCTATTAT TACCGGGCCG CTTTCCGGCT GGCTTATTGA AACCTACGGC TGGCGGGAGA TGTTTATCAT CGAAGGCTTG CTCTCTCTGG GACTGCTCTT TGTCTGGCTA CCTTTGGTTT CCGATCACCC GCATCAGGCA AAGTGGCTGG ATCCGAAAGA GCGCGCCTGG ATCGAACAAA AATTGCTGGC CGATCGCGCG TTGAGTATTG GCGGAGAGCA AAGCAGCATT CGCGGCGTAT TAAAAAGCAT CAACCTGTGG AAGCTTGTCG GTATCTATTT CTTCGTACAG GTCGGCTTCT ATGGCTTCGC GCTATGGATG CCAAATCTGA TTAAACACCT GACCGGCAGC GGCATGACCA TCGTTGGGGT ACTCACTGCG GCGCCTTACG TTCTGTGCAT TATCGGTCAG TATTACATCG CCAAATGGTG TGATAAAACG ATGAATCGCC GCCTTTACAC GGCTATTCCT CTGCTGGGTT TCGCGGTCTG CCTCGCCCTC TCCTTATTAC TGAAAGATAA CGTCTGGCTC GCCTACGGCA TGATGGTTAT TTGCGGGTTC TTCCTGCAAG CCTATGCCGG TCCATTCTGG ACGCTGCCGC CATTACTCTT CGCCCCCAAC GTTCTGGGCG GCGTGCGCGG CACGATCAAC GCCCTGGGCA ACATTGGCGG CTTTATCGGT CCGTACCTCG TCGGGCTGTT AACGGTGACG TTCTCGCAAA CAGCAGGAAT GACCGTACTG GTTGCCGCCC TGCTTATCGC CGTTGGACTG CTTTTCAGCT TACCTTCTGT TACCGCTCGT CCTGCAGGTA GCAGTAACAC ACCTAACACC TCGACGCCGG GTGCGTCACT TAAACAGGAA GGAATCGCCA AATGA
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Protein sequence | MMSIEIEKPT TRGRWLHIIP ATILVYIVAY MDRTNIAIGI AGGMDEDLGM TASFAGLVAG IFFIGYIFLQ IPGGQIAERL SAKKLIAWTI VAWGGFALLT GFVQTPTQLL IIRFVLGVAE GAVYPAILAL IGHWFPNEER ARAIAYFQMN LAVASIITGP LSGWLIETYG WREMFIIEGL LSLGLLFVWL PLVSDHPHQA KWLDPKERAW IEQKLLADRA LSIGGEQSSI RGVLKSINLW KLVGIYFFVQ VGFYGFALWM PNLIKHLTGS GMTIVGVLTA APYVLCIIGQ YYIAKWCDKT MNRRLYTAIP LLGFAVCLAL SLLLKDNVWL AYGMMVICGF FLQAYAGPFW TLPPLLFAPN VLGGVRGTIN ALGNIGGFIG PYLVGLLTVT FSQTAGMTVL VAALLIAVGL LFSLPSVTAR PAGSSNTPNT STPGASLKQE GIAK
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