Gene SNSL254_A3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3797 
Symbol 
ID6483803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3668454 
End bp3669788 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content54% 
IMG OID642739064 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002042775 
Protein GI194445088 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.653013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones113 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCA TTGAAATAGA GAAACCGACC ACACGAGGGC GCTGGCTGCA TATTATTCCA 
GCCACGATCC TCGTTTATAT CGTGGCCTAT ATGGACAGGA CCAATATCGC CATTGGGATC
GCAGGCGGCA TGGATGAAGA TTTAGGCATG ACGGCTTCTT TTGCCGGTCT GGTCGCCGGG
ATCTTCTTTA TTGGTTATAT CTTCCTGCAA ATTCCCGGCG GTCAGATAGC CGAGCGGCTA
AGCGCCAAAA AGTTAATTGC CTGGACAATC GTCGCCTGGG GTGGCTTTGC CCTGCTGACC
GGTTTTGTTC AGACACCGAC GCAGTTGTTG ATTATCCGCT TTGTGCTCGG CGTGGCGGAA
GGTGCTGTGT ATCCCGCCAT TCTGGCGCTG ATTGGCCACT GGTTCCCAAA TGAGGAGCGC
GCCAGGGCTA TCGCCTATTT CCAGATGAAC CTGGCCGTCG CTTCTATTAT TACCGGGCCG
CTTTCCGGCT GGCTTATTGA AACCTACGGC TGGCGGGAGA TGTTTATCAT CGAAGGCTTG
CTCTCTCTGG GACTGCTCTT TGTCTGGCTA CCTTTGGTTT CCGATCACCC GCATCAGGCA
AAGTGGCTGG ATCCGAAAGA GCGCGCCTGG ATCGAACAAA AATTGCTGGC CGATCGCGCG
TTGAGTATTG GCGGAGAGCA AAGCAGCATT CGCGGCGTAT TAAAAAGCAT CAACCTGTGG
AAGCTTGTCG GTATCTATTT CTTCGTACAG GTCGGCTTCT ATGGCTTCGC GCTATGGATG
CCAAATCTGA TTAAACACCT GACCGGCAGC GGCATGACCA TCGTTGGGGT ACTCACTGCG
GCGCCTTACG TTCTGTGCAT TATCGGTCAG TATTACATCG CCAAATGGTG TGATAAAACG
ATGAATCGCC GCCTTTACAC GGCTATTCCT CTGCTGGGTT TCGCGGTCTG CCTCGCCCTC
TCCTTATTAC TGAAAGATAA CGTCTGGCTC GCCTACGGCA TGATGGTTAT TTGCGGGTTC
TTCCTGCAAG CCTATGCCGG TCCATTCTGG ACGCTGCCGC CATTACTCTT CGCCCCCAAC
GTTCTGGGCG GCGTGCGCGG CACGATCAAC GCCCTGGGCA ACATTGGCGG CTTTATCGGT
CCGTACCTCG TCGGGCTGTT AACGGTGACG TTCTCGCAAA CAGCAGGAAT GACCGTACTG
GTTGCCGCCC TGCTTATCGC CGTTGGACTG CTTTTCAGCT TACCTTCTGT TACCGCTCGT
CCTGCAGGTA GCAGTAACAC ACCTAACACC TCGACGCCGG GTGCGTCACT TAAACAGGAA
GGAATCGCCA AATGA
 
Protein sequence
MMSIEIEKPT TRGRWLHIIP ATILVYIVAY MDRTNIAIGI AGGMDEDLGM TASFAGLVAG 
IFFIGYIFLQ IPGGQIAERL SAKKLIAWTI VAWGGFALLT GFVQTPTQLL IIRFVLGVAE
GAVYPAILAL IGHWFPNEER ARAIAYFQMN LAVASIITGP LSGWLIETYG WREMFIIEGL
LSLGLLFVWL PLVSDHPHQA KWLDPKERAW IEQKLLADRA LSIGGEQSSI RGVLKSINLW
KLVGIYFFVQ VGFYGFALWM PNLIKHLTGS GMTIVGVLTA APYVLCIIGQ YYIAKWCDKT
MNRRLYTAIP LLGFAVCLAL SLLLKDNVWL AYGMMVICGF FLQAYAGPFW TLPPLLFAPN
VLGGVRGTIN ALGNIGGFIG PYLVGLLTVT FSQTAGMTVL VAALLIAVGL LFSLPSVTAR
PAGSSNTPNT STPGASLKQE GIAK