Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3787 |
Symbol | malQ |
ID | 6484563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3653110 |
End bp | 3655188 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642739054 |
Product | 4-alpha-glucanotransferase |
Protein accession | YP_002042765 |
Protein GI | 194443621 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1640] 4-alpha-glucanotransferase |
TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 110 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATA AACGTCTCGA TAGTGCCGCG CTGGCGGCGG GGATCAGCCC CAGTTACATC AATGCTCATG GCAAACCGCA GTCTATTGGC GCTGAAACCA AGAGACGTTT GCTGGCGGCG ATGCACGGCA CGACAACAGG ACCACAGGCG GTCGTGCCGA ATGTGAAGGT TTATACCGCG GGTAAAAAAA TGGCGTTGCC GGTAGAGGGG CGCGGCGAGT TTGCCTGGCT GCTGACTACG GAAGAGGGCG AGCATTACAA AGGGCGCGTG ACGGGCGGTA AAAAACTTAA CCTGCCGGCT ACGTTGCCGG AGGGCTACCA CACCCTGACG TTGACCCAGG ATGAACAGCG TACGCACTGC CGGATTATCG TTGCCCCGCC GCGATGCTAT GAGCCGCAGG CGCTGCTGGA AGGGAAAAAA CTGTGGGGGG CCTGCGTCCA GCTTTATACT CTGCGTTCAG AAAAAAACTG GGGTATTGGC GATTTCGGCG ATTTGAAGTC GATGCTGGTC GACGTGGCGA CACGCGGCGG CGCGTTTATC GGCCTGAACC CGATCCACGC GCTTTATCCG GCGAATCCGG AGAGCGCCAG TCCCTACAGC CCCTCGTCTC GTCGCTGGCT GAACGTGATA TATATCGACG TCAACACCGT CGAAGATTTC CGCCTGAGCG AAGAGGCGCA GGCATGGTGG CAAATGCCCG CCACACAGCA AAAGCTGCGA CAGGCACGCG ATGCGCAATG GGTGGATTAC GCTACCGTTA CCGCGCTGAA AATCACGGCG CTGCGGATGG CGTGGACGCG GTTTGCCGCT CGCGACGATG CGCAAATGGC GGAGTTTCGT CACTTTATCG CCCGCGAAGG CGAGAGCCTT TACTGGCAGG CGGCATTCGA CGCGCTGCAT GCGTATCAGG TAAAAGAGGA TGAGCAGCGC TGGGGCTGGC CAGCCTGGCC GGAGGCGTAC CAGTCGGTAG AGTCTCCCGC GGTAAAACAA TTCTGTGAAG CGCACCGCGA AGAGGTGGAG TTTTACCTCT GGCTTCAGTG GCTGGCCTGG CGCCAATTCG CCGCCTGCTG GGATACCTGC CAGAGTTTTA AACTACCGAT TGGTCTGTAC CGCGATCTGG CGGTTGGCGT AGCGGAAGGC GGCGCGGAAA CCTGGTGCGA CCGGGAGCTG TACTGCCTGA AAGCATCTGT CGGCGCGCCG CCGGATATCC TCGGCCCGCT CGGTCAGAAC TGGGGGCTGC CGCCAATGGA CCCGCATATC ATTGTCGCCC GGGCGTATGA GCCCTTTATC GACCTGCTGC GCGCCAATAT GCAAAACTGC GGCGCGTTGC GCATTGACCA TGTCATGTCG TTGCTGCGTC TGTGGTGGAT ACCGTATGGC GAAACAGCGG ATCAGGGGGC TTACGTCCAT TATCCGGTAG ATGATTTGCT TTCTATTCTG GCGCTGGAGA GCCAACGTCA CCGTTGTATG GTGATAGGCG AAGATCTGGG GACGGTGCCA GTTGAGATTG TCGGCAAGCT GCGCGATAGC GGGGTCTATT CTTATAAAGT GCTGTGGTTT GAAAATGACC TTGAGAAAAA CTTCCGCGCG CCAGGCGCGT ATCCGCAACA ATCGATGGCT GTCGCCTCGA CGCACGATCT CCCCACGCTG CGCGGCTATT GGGAATGCGG TGACCTGACG TTGGGTAAAG CTCTGGGGCT TTATCCGGAT GAAGTGATTC TGCGCGGGCT GTATGAGGAT CGCGAGCGGG CGAAACAGGG GCTATTGGAC GCGCTGCATA AATATGGCTG TCTGCCAAAA CGCGCCGGGC ATAAGGCATC GTTAATGTCG ATGACGCCAA CGCTAAATCG CGGACTTCAG CGCTATATCG CCGACAGTAA CAGCGGTCTA TTGGGGCTTC AGCCGGAGGA CTGGCTGGAT ATGGCCGATC CGGTTAACGT ACCGGGCACC AGCGATCAGT ATAAAAACTG GCGGCGGAAA TTGTCTGCAT CTCTTGAGGC CATGTTTGCC GATGAGGGCG TAAACAAGCT GATTAAGGAT TTGGATAAGC GCCGAAAAGC GGCCGCGAAG AAGAAGTAA
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Protein sequence | MENKRLDSAA LAAGISPSYI NAHGKPQSIG AETKRRLLAA MHGTTTGPQA VVPNVKVYTA GKKMALPVEG RGEFAWLLTT EEGEHYKGRV TGGKKLNLPA TLPEGYHTLT LTQDEQRTHC RIIVAPPRCY EPQALLEGKK LWGACVQLYT LRSEKNWGIG DFGDLKSMLV DVATRGGAFI GLNPIHALYP ANPESASPYS PSSRRWLNVI YIDVNTVEDF RLSEEAQAWW QMPATQQKLR QARDAQWVDY ATVTALKITA LRMAWTRFAA RDDAQMAEFR HFIAREGESL YWQAAFDALH AYQVKEDEQR WGWPAWPEAY QSVESPAVKQ FCEAHREEVE FYLWLQWLAW RQFAACWDTC QSFKLPIGLY RDLAVGVAEG GAETWCDREL YCLKASVGAP PDILGPLGQN WGLPPMDPHI IVARAYEPFI DLLRANMQNC GALRIDHVMS LLRLWWIPYG ETADQGAYVH YPVDDLLSIL ALESQRHRCM VIGEDLGTVP VEIVGKLRDS GVYSYKVLWF ENDLEKNFRA PGAYPQQSMA VASTHDLPTL RGYWECGDLT LGKALGLYPD EVILRGLYED RERAKQGLLD ALHKYGCLPK RAGHKASLMS MTPTLNRGLQ RYIADSNSGL LGLQPEDWLD MADPVNVPGT SDQYKNWRRK LSASLEAMFA DEGVNKLIKD LDKRRKAAAK KK
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