| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3786 |
|---|
| Symbol | gntT |
|---|
| ID | 6485235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 3651675 |
|---|
| End bp | 3652991 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642739053 |
|---|
| Product | high-affinity gluconate transporter |
|---|
| Protein accession | YP_002042764 |
|---|
| Protein GI | 194444552 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2610] H+/gluconate symporter and related permeases |
|---|
| TIGRFAM ID | [TIGR00791] gluconate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 111 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTAG TCATCGTTGC TATCGGTGTT ATCTTGTTAC TTCTTCTGAT GATCCGCTTC
AAAATGAACG GATTTATCGC CCTTGTCCTG GTAGCGCTCG CTGTCGGGTT GATGCAGGGA
ATGCCGCTGG ATAAAGTCAT CGGCTCCATC AAAGCCGGTG TCGGCGGTAC GCTTGGCAGT
CTGGCCCTGA TTATGGGGTT CGGCGCCATG CTGGGCAAAA TGCTTGCCGA CTGCGGCGGC
GCTCAACGTA TCGCCACTAC CCTGATCGCG AAATTTGGTA AAAAGCATAT TCAGTGGGCC
GTAGTGTTAA CCGGCTTTAC CGTCGGCTTC GCTCTGTTCT ATGAAGTGGG CTTCGTTCTG
ATGCTGCCGC TGGTATTCAC CATTGCCGCA GCGGCGAATA TCCCGTTACT GTACGTCGGC
GTGCCGATGG CCGCGGCGCT TTCCGTCACA CACGGCTTCC TGCCGCCGCA CCCGGGCCCA
ACCGCAATCG CCACGATTTT CCATGCCGAT ATGGGTAAGA CGCTGCTGTT TGGTACGATT
CTGGCGATCC CGACCGTGAT CCTTGCCGGC CCGGTTTACG CCCGTTTCCT GAAAGGTATC
GATAAGCCGA TCCCGGAAGG CCTGTACAGC GCGAAAACTT TTACGGAAGA AGAGATGCCG
GGCTTTGGCG TCAGCGTCTG GACGTCGCTG GTTCCGGTTA TTCTGATGGC GATGCGTGCG
ATTGCCGAGA TGATTCTGCC AAAAGGCCAC GCTTTCCTGC CCGTTGCCGA GTTCCTGGGC
GACCCGGTAA TGGCTACGTT AATTGCCGTA CTGATTGCGA TGTTCACCTT TGGCCTGAAC
CGCGGGCGTT CCATGGATCA GATTAACGAT ACGCTGGTCT CTTCCATCAA AATTATCGCC
ATGATGCTGC TGATCATCGG CGGCGGCGGC GCATTCAAGC AGGTGCTGGT CGATAGCGGC
GTGGATAAAT ACATCGCTTC AATGATGCAT GAAACCAATG TCTCTCCGCT GTTGATGGCG
TGGTCTATCG CGGCGGTTCT GCGTATCGCG CTGGGCTCTG CGACTGTCGC GGCGATTACC
GCAGGCGGCA TTGCGGCGCC GCTGATCGCC ACTACCGGCG TTAGCCCTGA ACTGATGGTT
ATCGCAGTCG GTTCCGGGAG CGTGATTTTC TCTCACGTCA ACGACCCGGG CTTCTGGCTG
TTCAAAGAGT ATTTCAATTT GACTATCGGC GAGACCATTA AATCCTGGTC GATGCTGGAA
ACGATCATCT CCGTCTGCGG CCTGATCGGC TGTCTGCTGT TGGGTATGGT GGTTTAA
|
|---|
| Protein sequence | MPLVIVAIGV ILLLLLMIRF KMNGFIALVL VALAVGLMQG MPLDKVIGSI KAGVGGTLGS
LALIMGFGAM LGKMLADCGG AQRIATTLIA KFGKKHIQWA VVLTGFTVGF ALFYEVGFVL
MLPLVFTIAA AANIPLLYVG VPMAAALSVT HGFLPPHPGP TAIATIFHAD MGKTLLFGTI
LAIPTVILAG PVYARFLKGI DKPIPEGLYS AKTFTEEEMP GFGVSVWTSL VPVILMAMRA
IAEMILPKGH AFLPVAEFLG DPVMATLIAV LIAMFTFGLN RGRSMDQIND TLVSSIKIIA
MMLLIIGGGG AFKQVLVDSG VDKYIASMMH ETNVSPLLMA WSIAAVLRIA LGSATVAAIT
AGGIAAPLIA TTGVSPELMV IAVGSGSVIF SHVNDPGFWL FKEYFNLTIG ETIKSWSMLE
TIISVCGLIG CLLLGMVV
|
|---|
| |