| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3777 |
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| Symbol | |
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| ID | 6483757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3642408 |
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| End bp | 3644738 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642739044 |
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| Product | putative transcriptional accessory protein |
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| Protein accession | YP_002042755 |
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| Protein GI | 194442760 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 100 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATG ATTCTTTCTG CCGCATTATT GCGGGTGAAA TCCAGGCAAA TGCCGGGCAG
GTTGAAGCTG CCGTTCGCCT GCTTGACGAA GGGAACACCG TGCCGTTTAT CGCACGTTAT
CGTAAAGAAA TCACCGGCGG TCTGGATGAC ACGCAGTTGC GTAACCTGGA AACGCGTCTG
GGCTATCTGC GTGAGCTGGA AGACAGGCGT CAGGCCATCC TCAAGTCCAT TTCCGAACAA
GGCAAACTGA CCGATGAGCT GGCTGGCGCC ATCAACGCTA CGTTAAGTAA GACCGAGCTC
GAAGACCTCT ACCTGCCCTA TAAACCTAAA CGCCGCACCC GTGGACAAAT CGCCATTGAA
GCCGGCCTTG AGCCACTGGC CGATCTGCTC TGGAACGAGC CGTCCCACGA TCCTGACGTG
GAAGCGGCAA AGTACATTGA TGGCGACAAA GGCGTGGCGG ACACGAAGGC CGCGCTCGAC
GGCGCACGCT ACATTCTGAT GGAGCGCTTT GCCGAAGACG CCGCATTGCT GGCGAAAGTG
CGTGATTACC TGTGGAAGAA CGCCCATCTG GTCGCCACCG TCGTGAGCGG CAAAGAGGAA
GAAGGGGCAA AATTCCGCGA CTATTTCGAC CATCATGAGC CCATTGCTAA CGTCCCGTCT
CACCGTGCGC TGGCCATGTT CCGTGGTCGT AACGAAGGCA TTCTGCAACT TTCGCTCAAT
GCCGACCCAC AGTTTGATGA GCCGCCAAAA GAAAGCTACT GCGAGCAAAT CATCATGGAC
CATCTCGGCC TGCGGCTAAA TAACGCCCCG GCGGATAGCT GGCGCAAAGG CGTAGTGAGC
TGGACGTGGC GTATCAAAGT CTTAATGCAC CTCGAAACCG AACTGATGGG CACCGTGCGC
GAACGTGCGG AAGACGAAGC GATTAACGTG TTTGCGCGTA ACCTGCACGA CCTGCTGATG
GCAGCCCCCG CAGGCCTGCG CGCCACGATG GGCCTTGATC CTGGCCTGCG TACCGGCGTA
AAAGTCGCTG TCGTTGACGG CACCGGCAAG CTGGTGGCGA CGGATACCAT TTATCCGCAT
ACCGGTCAGG CGGCCAAAGC GGCTACCGTG ATCGCCGCGC TGTGCGAAAA ATACCACGTC
GAACTGGTCG CGATTGGCAA CGGTACGGCC TCGCGTGAAA CCGAACGCTT CTATCTCGAC
GTACAGAAAC AGTTCCCGAA CGTGACGGCG CAGAAAGTGA TCGTCAGCGA AGCGGGGGCG
TCCGTGTATT CCGCTTCTGA GCTGGCGGCG CAGGAGTTTC CGGATCTCGA CGTCTCCCTG
CGCGGCGCAG TCTCTATCGC CCGTCGTCTG CAGGATCCGC TGGCGGAACT GGTGAAAATC
GATCCGAAAT CGATCGGCGT CGGCCAATAT CAACACGATG TCAGCCAGAC GCAGCTGGCG
CGTAAGCTGG ATGCGGTGGT CGAAGACTGC GTAAACGCCG TCGGCGTCGA TTTGAATACC
GCCTCCGTGC CGCTGCTGAC CCGCGTCGCG GGCTTAACGC GCATGATGGC GCAAAACATC
GTCGCCTGGC GCGATGAGAA CGGTCAGTTC CAGAATCGCC AGCAACTGTT GAAGGTGAGC
CGTCTGGGGC CGAAAGCGTT TGAGCAGTGC GCGGGCTTCC TGCGTATTAA CCACGGCGAT
AACCCACTGG ATGCCTCCAC CGTCCACCCG GAAGCCTATC CGGTTGTCGA ACGCATTCTG
GCGGCGACGC AGCAAGCGCT AAAAGATCTG ATGGGCAACA GCAACGAATT GCGTCACCTC
AAGGCCGCTG ATTTTACCGA CGATAAATTC GGCGTGCCGA CCGTGAGCGA TATCATCAAA
GAGCTGGAAA AACCGGGCCG CGACCCGCGT CCTGAATTTA AAACCGCGCA ATTCGCCGAT
GGCGTTGAAA CCATGAACGA CCTGCTACCG GGGATGATTC TGGAAGGGGC GGTCACTAAC
GTCACCAATT TCGGCGCGTT TGTCGATATC GGCGTTCATC AGGATGGCCT GGTGCATATC
TCCTCGCTCT CGAATAAGTT CGTCGACGAT CCACACACCG TGGTAAAAGC TGGCGACATC
GTGAAGGTGA AAGTGCTGGA AGTGGATCTG CAACGTAAGC GTATTGCGCT GACGATGCGT
CTGGACGAAC AGCCCGGCGA AACCGCCGCT CGCCGCGGCG GCGCCGCCGA TCGCGCGCAG
GGCAACCGCC CGGCGTCAAA AGCGGCGAAA CCGCGCGGTC GTGACGCCCA GCCAGCCGGT
AACAGCGCCA TGATGGACGC GCTGGCAGCG GCAATGGGGA AAAAACGCTA A
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| Protein sequence | MMNDSFCRII AGEIQANAGQ VEAAVRLLDE GNTVPFIARY RKEITGGLDD TQLRNLETRL
GYLRELEDRR QAILKSISEQ GKLTDELAGA INATLSKTEL EDLYLPYKPK RRTRGQIAIE
AGLEPLADLL WNEPSHDPDV EAAKYIDGDK GVADTKAALD GARYILMERF AEDAALLAKV
RDYLWKNAHL VATVVSGKEE EGAKFRDYFD HHEPIANVPS HRALAMFRGR NEGILQLSLN
ADPQFDEPPK ESYCEQIIMD HLGLRLNNAP ADSWRKGVVS WTWRIKVLMH LETELMGTVR
ERAEDEAINV FARNLHDLLM AAPAGLRATM GLDPGLRTGV KVAVVDGTGK LVATDTIYPH
TGQAAKAATV IAALCEKYHV ELVAIGNGTA SRETERFYLD VQKQFPNVTA QKVIVSEAGA
SVYSASELAA QEFPDLDVSL RGAVSIARRL QDPLAELVKI DPKSIGVGQY QHDVSQTQLA
RKLDAVVEDC VNAVGVDLNT ASVPLLTRVA GLTRMMAQNI VAWRDENGQF QNRQQLLKVS
RLGPKAFEQC AGFLRINHGD NPLDASTVHP EAYPVVERIL AATQQALKDL MGNSNELRHL
KAADFTDDKF GVPTVSDIIK ELEKPGRDPR PEFKTAQFAD GVETMNDLLP GMILEGAVTN
VTNFGAFVDI GVHQDGLVHI SSLSNKFVDD PHTVVKAGDI VKVKVLEVDL QRKRIALTMR
LDEQPGETAA RRGGAADRAQ GNRPASKAAK PRGRDAQPAG NSAMMDALAA AMGKKR
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