Gene SNSL254_A3759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3759 
SymbolaroK 
ID6484848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3623508 
End bp3624029 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content50% 
IMG OID642739026 
Productshikimate kinase I 
Protein accessionYP_002042737 
Protein GI194443078 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00136839 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGA AACGCAATAT CTTTCTGGTT GGGCCTATGG GTGCCGGAAA AAGCACTATT 
GGGCGCCAGT TAGCTCAACA ACTCAATATG GAATTTTACG ATTCTGATCA AGAGATTGAG
AAACGAACCG GAGCTGATGT GGGCTGGGTC TTCGATGTTG AAGGTGAAGA CGGCTTCCGT
AATCGTGAAG AAAAAGTTAT CAACGAATTG ACGGAAAAAC AGGGTATTGT GCTGGCAACC
GGCGGTGGCT CTGTAAAATC GCGTGAAACG CGTAACCGTC TCTCCGCGCG TGGCGTCGTG
GTCTACCTTG AAACGACCAT CGAAAAACAA CTGGCGCGCA CGCAGCGTGA TAAAAAACGC
CCGCTGTTGC AGGTTGAAGC ACCGCCTCGC GAAGTTCTGG AAGCGCTGGC TAACGAACGC
AATCCGCTGT ACGAAGAGAT TGCCGACGTC ACCATTCGCA CCGACGATCA AAGCGCTAAG
GTTGTGGCAA ACCAGATTAT TCATATGCTG GAAAGCAACT AA
 
Protein sequence
MAEKRNIFLV GPMGAGKSTI GRQLAQQLNM EFYDSDQEIE KRTGADVGWV FDVEGEDGFR 
NREEKVINEL TEKQGIVLAT GGGSVKSRET RNRLSARGVV VYLETTIEKQ LARTQRDKKR
PLLQVEAPPR EVLEALANER NPLYEEIADV TIRTDDQSAK VVANQIIHML ESN