| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3743 |
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| Symbol | tsgA |
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| ID | 6483677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3604089 |
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| End bp | 3605270 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642739012 |
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| Product | hypothetical protein |
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| Protein accession | YP_002042723 |
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| Protein GI | 194446244 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.0396479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAACA GCAACCGCAT CAAGCTCACA TGGATCAGCT TTCTTTCCTA CGCCCTGACC
GGGGCGCTGG TGATTGTCAC CGGGATGGTG ATGGGAAATA TCGCAGACTA TTTTCAGCTG
CCCGTTTCCA GCATGAGTAA CACCTTTACT TTCCTGAATG CCGGGATTTT GATCTCGATC
TTCCTCAATG CGTGGCTGAT GGAAATCATC CCGCTGAAAA CACAGCTACG CTTTGGTTTT
ATCCTGATGG TGCTGGCGGT GGCCGGGCTG ATGTTCAGCC ATAGCCTGGC GTTGTTCTCA
GCGGCGATGT TTGTGCTGGG GCTGGTCAGC GGGATCACCA TGTCGATTGG CACCTTCCTG
ATTACGCAAC TGTATGAAGG GCGTCAGCGC GGTTCCCGAC TGCTGTTTAC CGACTCCTTC
TTCAGCATGG CGGGGATGAT TTTTCCTATG GTCGCCGCCT TCCTGCTGGC GCGTAGTATT
GAGTGGTACT GGGTCTACGC CTGCATCGGC CTGGTCTACC TGGCGATTTT CATCCTGACC
TTCGGCTGTG AATTTCCGGC GCTGGGTAAA CATGCGCAGC ACTCTCAGGC ACCTGTCGTC
AAAGAAAAAT GGGGCATTGG CGTACTGTTT CTCGCCGTCG CCGCGCTGTG CTATATCCTC
GGTCAATTGG GCTTTATCTC CTGGGTGCCG GAATACGCCA AAGGCCTCGG CATGAGCCTG
AATGACGCCG GGGCGCTGGT GAGTGATTTC TGGATGTCCT ATATGTTTGG CATGTGGGCG
TTCAGCTTTA TCCTGCGCTT TTTCGATCTG CAACGCATTC TGACCGTACT GGCGGGTATG
GCGGCGGTAC TGATGTATTT GTTTATTACC GGCACGCAGG CGCATATGCC GTGGTTTATT
CTGACGCTGG GCTTCTTCTC CAGCGCCATT TATACCTCCA TCATTACGCT GGGATCGCAG
CAAACGAAAG TGGCCTCGCC TAAGCTGGTT AACTTTATTC TGACCTGCGG CACTATCGGA
ACGATGCTGA CCTTCGTCGT CACCGGCCCG ATTGTGGCGC ACAGCGGCCC ACAGGCGGCG
TTACTCACCG CGAATGGTCT GTATGCGGTG GTCTTTGTGA TGTGCTTTGC GCTCGGTTTT
GTATCCCGTC ATCGTCAGCA TAGCGCGCCG GCTACGCATT GA
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| Protein sequence | MTNSNRIKLT WISFLSYALT GALVIVTGMV MGNIADYFQL PVSSMSNTFT FLNAGILISI
FLNAWLMEII PLKTQLRFGF ILMVLAVAGL MFSHSLALFS AAMFVLGLVS GITMSIGTFL
ITQLYEGRQR GSRLLFTDSF FSMAGMIFPM VAAFLLARSI EWYWVYACIG LVYLAIFILT
FGCEFPALGK HAQHSQAPVV KEKWGIGVLF LAVAALCYIL GQLGFISWVP EYAKGLGMSL
NDAGALVSDF WMSYMFGMWA FSFILRFFDL QRILTVLAGM AAVLMYLFIT GTQAHMPWFI
LTLGFFSSAI YTSIITLGSQ QTKVASPKLV NFILTCGTIG TMLTFVVTGP IVAHSGPQAA
LLTANGLYAV VFVMCFALGF VSRHRQHSAP ATH
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