Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3670 |
Symbol | aroE |
ID | 6482750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3555283 |
End bp | 3556104 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642738942 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_002042653 |
Protein GI | 194445984 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0245991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGAAA CCTATGCTGT TTTTGGAAAT CCGATTGCGC ACAGCAAATC GCCATTTATT CATCAGCAAT TTGCTCAGCA GCTAGATATT GTTCACCCCT ATGGTCGCGT GCTGGCCCCT ATTAATAATT TCATTAATAC GCTTGATGCC TTTTTCGCGG CAGGGGGAAA AGGCGCAAAC ATCACAGTAC CTTTTAAAGA GGAGGCGTTT GCGCGTTCGG ATGAGTTAAC GGAACGAGCA TCGCTGGCGG GAGCCGTCAA TACATTAAAA CGGCTGGAAG ATGGTCGTTT GCTTGGCGAC AATACTGACG GTATCGGTTT ATTAAGCGAT CTCGAACGTT TAAATTTTAT CCGCCCAGGA TGGCGTATTT TGCTGATTGG CGCGGGCGGC GCATCCCGGG GCGTGCTGTT ACCTCTGCTT TCTTTGGATT GCGCGGTCAC TATCACCAAC CGTACAGCTT CACGTGCCGA AGCGTTGGCG AAAATCTTTG CTCATACCGG CAGCGTTCAT GCCACGGATA TGGACAAGCT GGATGGTTGT GAGTTTGACC TAATTATTAA TGCGACCTCC AGCGGCATAC GGGGCGAAAT CCCGGCGATA CCAGCGTCAC TTATTCACCC TTCCCTCTGT TGCTATGACA TGTTCTATCA AAAAGGGAAT ACGCCATTTC TCTCCTGGTG TGTACAACAG GGCGCAAAAC GCTACGCAGA TGGGCTGGGA ATGCTGGTGG GGCAGGCTGC ACATGCCGTT TTGCTTTGGC ACGGTGTATT ACCGCAGGTC GAGCCAGTGA TTGAGCAGCT ACAGCAGGAA TTATTAGCGT GA
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Protein sequence | MMETYAVFGN PIAHSKSPFI HQQFAQQLDI VHPYGRVLAP INNFINTLDA FFAAGGKGAN ITVPFKEEAF ARSDELTERA SLAGAVNTLK RLEDGRLLGD NTDGIGLLSD LERLNFIRPG WRILLIGAGG ASRGVLLPLL SLDCAVTITN RTASRAEALA KIFAHTGSVH ATDMDKLDGC EFDLIINATS SGIRGEIPAI PASLIHPSLC CYDMFYQKGN TPFLSWCVQQ GAKRYADGLG MLVGQAAHAV LLWHGVLPQV EPVIEQLQQE LLA
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