| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3648 |
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| Symbol | dusB |
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| ID | 6484685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3537312 |
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| End bp | 3538277 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642738923 |
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| Product | tRNA-dihydrouridine synthase B |
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| Protein accession | YP_002042640 |
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| Protein GI | 194443531 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00267806 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.000397185 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCATCG GACAATATCA GCTCAGAAAT CGCCTGATCG CAGCGCCCAT GGCTGGCATT
ACTGACAGAC CTTTCCGGAC GCTGTGCTAT GAGATGGGAG CAGGATTGAC AGTATCCGAG
ATGATGTCTT CTAACCCGCA AGTGTGGGAA AGCGATAAAT CTCGTTTACG GATGGTGCAC
GTTGATGAGC CAGGAATTCG CACGGTGCAA ATTGCCGGTA GCGACCCTGT TGAGATGGCC
GATGCCGCAC GTATTAACGT GGAAAGCGGC GCCCAGATTA TTGATATCAA TATGGGGTGC
CCGGCGAAGA AAGTGAATCG TAAGCTGGCA GGTTCAGCCC TCTTGCAGTA CCCGGATTTA
GTGAAGTCTA TACTCATCGG GGTCGTAAAC GCAGTGGACG TTCCTGTGAC TCTCAAGATT
CGCACCGGCT GGGCGCCGGA ACACCGTAAC TGCGTAGAGA TTGCCCAACT GGCTGAAGAT
TGTGGTATTC AGGCTCTGAC CATCCATGGC CGCACCCGCG CCTGTTTGTT CAACGGAGAA
GCTGAATACG ACAGTATTCG GGCAGTTAAG CAGAAAGTTT CCATTCCGAT TATCGCGAAT
GGCGACATTA CTAACCCGCA TAAAGCCAGA GCTGTTCTCG ACTATACAGG GGCGGATGCC
CTGATGATAG GCCGCGCAGC TCAGGGAAGA CCCTGGATCT TTCGGGAAAT CCAGCATTAT
CTGGACACTG GGGAGCTGCT TCCGCCGCTG CCGCTGGCAG AGGTAAAGCG CTTGCTTTGC
ACGCATGTTC GGGAACTGCA TGACTTTTAC GGTCAGGCAA AAGGGTACCG AATCGCGCGT
AAACACGTCT CCTGGTATCT CCAGGAGCAC GCTCCAGACG ACCAGTTTCG GCGCACATTC
AACGCTATTG AGGACGCCAG CGAACAGCTG GAGGCGTTGG AGGCATACTT CGAAAATTTT
GCGTAA
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| Protein sequence | MRIGQYQLRN RLIAAPMAGI TDRPFRTLCY EMGAGLTVSE MMSSNPQVWE SDKSRLRMVH
VDEPGIRTVQ IAGSDPVEMA DAARINVESG AQIIDINMGC PAKKVNRKLA GSALLQYPDL
VKSILIGVVN AVDVPVTLKI RTGWAPEHRN CVEIAQLAED CGIQALTIHG RTRACLFNGE
AEYDSIRAVK QKVSIPIIAN GDITNPHKAR AVLDYTGADA LMIGRAAQGR PWIFREIQHY
LDTGELLPPL PLAEVKRLLC THVRELHDFY GQAKGYRIAR KHVSWYLQEH APDDQFRRTF
NAIEDASEQL EALEAYFENF A
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