Gene SNSL254_A3639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3639 
Symbol 
ID6484378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3529052 
End bp3530026 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content57% 
IMG OID642738914 
Producthypothetical protein 
Protein accessionYP_002042631 
Protein GI194443763 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.000530088 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGCGT TGATCTTAGA ACAGCAGGAC GGTAAAACCC TCGCATCCGT GCAACATCTC 
GAAGAGAGTC AACTGCCGGC AGGTGATGTG ACGGTGGATG TCCACTGGTC CAGCCTGAAT
TATAAAGATG CTCTGGCTAT CACCGGAAAA GGGAAAATTA TCCGTCATTT TCCGATGATT
CCTGGTATTG ATTTCGCCGG CACCGTTCAC GCAAGCGAAG ATCCTCGCTT TCATGCAGGC
CAGGAAGTAC TACTGACTGG CTGGGGCGTG GGCGAAAACC ACTGGGGCGG CCTGGCCGAA
CGCGCACGCG TTAAAGGCGA CTGGCTGGTC GCGCTGCCTG CGGGACTGAG CAGCCGTAAC
GCCATGATCA TCGGCACCGC CGGTTTTACC GCCATGCTGT GCGTCATGGC GCTTGAAGAT
GCAGGTATTC GCCCGCAAGA CGGTGAGGTT GTCGTCACCG GCGCCAGCGG CGGTGTGGGC
AGCACTGCCG TTGCATTACT GCATAAGCTG GGCTATCAGG TTGCAGCAGT ATCAGGACGT
GAAAGCACCC ACGGCTATCT TAAGAGCCTG GGAGCTAACC GTATTCTCAG CCGCGATGAG
TTTGCTGAAT CTCGCCCGTT GGAAAAACAG CTGTGGGCCG GTGCAATTGA TACCGTTGGC
GATAAAGTGC TGGCGAAAGT GCTGGCACAG ATGAACTATG GCGGTTGCGT GGCCGCCTGC
GGCTTGGCGG GCGGCTTCGC GCTGCCGACC ACCGTTATGC CATTCATTCT GCGTAATGTG
CGTTTGCAAG GGGTGGACTC GGTGATGACC CCACCGGCAC GTCGCGCAGA AGCCTGGGCG
CGTTTGGTTA AGGATCTGCC GGAATCGTTC TATGCTCAGG CCGCCACAGA GATTACGCTG
GCGGATGCGC CGAAGTTCGC CGATGCCATC ATCAATAATC AGGTTCAGGG CCGTACGCTG
GTGAAGATAA AATAA
 
Protein sequence
MQALILEQQD GKTLASVQHL EESQLPAGDV TVDVHWSSLN YKDALAITGK GKIIRHFPMI 
PGIDFAGTVH ASEDPRFHAG QEVLLTGWGV GENHWGGLAE RARVKGDWLV ALPAGLSSRN
AMIIGTAGFT AMLCVMALED AGIRPQDGEV VVTGASGGVG STAVALLHKL GYQVAAVSGR
ESTHGYLKSL GANRILSRDE FAESRPLEKQ LWAGAIDTVG DKVLAKVLAQ MNYGGCVAAC
GLAGGFALPT TVMPFILRNV RLQGVDSVMT PPARRAEAWA RLVKDLPESF YAQAATEITL
ADAPKFADAI INNQVQGRTL VKIK