| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3622 |
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| Symbol | mdh |
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| ID | 6485566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3508716 |
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| End bp | 3509654 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642738897 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_002042614 |
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| Protein GI | 194445066 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.817971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.609182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCG CAGTCCTCGG CGCTGCTGGT GGTATCGGTC AGGCGCTGGC ATTACTTTTA
AAAAACCAAC TGCCTTCAGG TTCAGAACTC TCCCTGTACG ACATCGCTCC AGTGACTCCC
GGTGTGGCCG TTGATTTGAG CCACATCCCC ACCGCTGTAA AAATCAAAGG TTTCTCCGGT
GAAGACGCAA CCCCGGCGCT TGAAGGCGCT GACGTAGTAC TGATTTCTGC GGGTGTGGCG
CGTAAGCCGG GTATGGACCG TTCCGACCTG TTTAACGTTA ACGCTGGCAT CGTGAAAAAC
CTGGTGCAGC AGATCGCTAA AACCTGCCCG AAAGCGTGCG TGGGCATTAT CACCAACCCG
GTGAACACCA CCGTTGCGAT TGCGGCGGAA GTGCTGAAAA AAGCAGGCGT ATACGACAAA
AACAAACTGT TTGGCGTTAC CACGCTGGAT ATCATCCGCT CTAATACCTT TGTCGCAGAG
CTGAAAGGTA AGCGGCCAAC GGAAGTTGAA GTTCCGGTGA TTGGCGGACA CTCCGGCGTG
ACGATTCTGC CGCTGCTGTC GCAGATTCCA GGCGTAAGTT TTACCGAACA AGAAGCGGCC
GAGCTGACTA AACGTATTCA GAACGCCGGT ACTGAAGTCG TCGAGGCGAA AGCCGGCGGC
GGATCGGCAA CCCTCTCTAT GGGCCAGGCT GCCGCGCGTT TCGGTCTTTC TCTGGTTCGC
GCTCTGCAGG GCGAAAAAGG CGTGGTGGAA TGCGCCTATG TGGAAGGCGA CGGTCAGTAT
GCCCGTTTCT TCTCTCAGCC GCTGCTGCTG GGTAAAAACG GTGTAGAAGA GCGTAAATCC
ATCGGCACAC TGAGCGCTTT CGAGCAACAT TCGCTGGACG CTATGCTGGA TACGCTGAAA
AAAGATATTC AGTTGGGTGA AGATTTTATT AATAAATAA
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| Protein sequence | MKVAVLGAAG GIGQALALLL KNQLPSGSEL SLYDIAPVTP GVAVDLSHIP TAVKIKGFSG
EDATPALEGA DVVLISAGVA RKPGMDRSDL FNVNAGIVKN LVQQIAKTCP KACVGIITNP
VNTTVAIAAE VLKKAGVYDK NKLFGVTTLD IIRSNTFVAE LKGKRPTEVE VPVIGGHSGV
TILPLLSQIP GVSFTEQEAA ELTKRIQNAG TEVVEAKAGG GSATLSMGQA AARFGLSLVR
ALQGEKGVVE CAYVEGDGQY ARFFSQPLLL GKNGVEERKS IGTLSAFEQH SLDAMLDTLK
KDIQLGEDFI NK
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