Gene SNSL254_A3619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3619 
Symbol 
ID6482527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3505836 
End bp3507104 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content53% 
IMG OID642738894 
Productanion transporter 
Protein accessionYP_002042611 
Protein GI194446603 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.254252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCA TTACCCTTAC CTTATGTTTA TTGGTGTTCG CTATCGTCAT GTTTGTATGG 
GAAAAAGTGC CACTTGCCGT CACTTCCATG ATTGTCTGCG TGGCCTTAGT GATCACCGGC
GTTCTGAATA TCAAACAGGC CTTTGCTGGC TTTATCGACA CTAACGTCAT CCTCTTTGTC
GCGATGTTCA TCGTGGGCGG CGCGTTGTTC GAGACCGGTA TGGCAAACAA AGTGGGCGGC
GTCATCACGC GCTTCGCGAA AACAGAAAAA CAGCTGATCT TCACCATTAT GGTGGTGGTG
GGCTTGATGT CTGGCGTCCT TTCTAACACC GGTACCGCTG CGGTTTTGAT TCCGGTGGTG
ATCGGCGTGG CGGCAAAATC GGGCTTCTCG CGTTCTCGTC TACTGATGCC GCTGGTTTTT
GCCGCTGCGT TGGGCGGTAA CCTGTCGTTA ATTGGCGCGC CGGGAAATCT TATCGCGCAG
TCTGCGCTAC AGAATATTGG CGGCGGCTTT GGCTTTTTTG AATACGCAAA AATCGGTCTC
CCGATGCTCA TCTGCGGCAT TCTCTACTTC CTGACTATTG GCTATCGCTT TCTGCCGAAT
AATGCGACCG GCGGTGAGGT GGGGAGCGTC GGGGTGCAAC GTGACTACAG CCATGTTCCA
CAGTGGAAAC AACGGCTCTC ACTAGTGGTG TTGATCGCAA CGATCCTCGG CATGATCTTT
GAGAAGAAGA TCGGTGTCAG CCTGGCCGTG ACCGGTTGTA TTGGCGCTCT TGTGCTGGTA
GTTACCGGCG TACTCACGGA AAAACAGGCC TATAAAGCCA TTGATTCACA GACTATTTTT
ATCTTTGGCG GCACCCTGGC GCTGGCAAAA GCGCTGGAAA TGACCGGGGC AGGCAAGCTG
GTTGCGGACT ATGTAATCGG CATGCTGGGG CAAAACTCCT CACCGTTCAT GTTGCTGATC
GCCGTTTTCG CCTTATCCGT TGTGATGACC AACTTTATGT CCAATACCGC AACGACAGCG
CTATTGGTGC CGGTGAGTTT GTCCATTGCC GCAGGCATGG GGGCCGACCC GCGTGCGGTT
CTGATGGCGA CGGTCATTGG CGGTTCCTGC GCCTACGCAA CCCCTATCGG TATGCCTGCC
AACATGATGG TGCTCTCCGC GGGTGGCTAT AAATTTGTCG ACTACGCTAA GGCCGGTATC
CCCCTGATTA TCGTTTCAAC CATTGTCAGC TTGATCCTGC TGCCAATCCT TTTCCCTTTT
CATCCGTAA
 
Protein sequence
MEPITLTLCL LVFAIVMFVW EKVPLAVTSM IVCVALVITG VLNIKQAFAG FIDTNVILFV 
AMFIVGGALF ETGMANKVGG VITRFAKTEK QLIFTIMVVV GLMSGVLSNT GTAAVLIPVV
IGVAAKSGFS RSRLLMPLVF AAALGGNLSL IGAPGNLIAQ SALQNIGGGF GFFEYAKIGL
PMLICGILYF LTIGYRFLPN NATGGEVGSV GVQRDYSHVP QWKQRLSLVV LIATILGMIF
EKKIGVSLAV TGCIGALVLV VTGVLTEKQA YKAIDSQTIF IFGGTLALAK ALEMTGAGKL
VADYVIGMLG QNSSPFMLLI AVFALSVVMT NFMSNTATTA LLVPVSLSIA AGMGADPRAV
LMATVIGGSC AYATPIGMPA NMMVLSAGGY KFVDYAKAGI PLIIVSTIVS LILLPILFPF
HP