| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3598 |
|---|
| Symbol | |
|---|
| ID | 6483793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 3486499 |
|---|
| End bp | 3486966 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642738874 |
|---|
| Product | putative cytoplasmic protein |
|---|
| Protein accession | YP_002042591 |
|---|
| Protein GI | 194443112 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2731] Beta-galactosidase, beta subunit |
|---|
| TIGRFAM ID | [TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 88 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGATGG GGGAAGTACA GTCGTTGCCT TCTTGCGGGT TGCATCCGCG ATTGTTGGAT
GCCTTGACTC TCGCGCTGGC GGCAAGGCCG CAGGAGAAAG CGCCGGGGCG CTATGAATTG
CAGGGCGACA ATGTCTTTAT GAATGTAATG CAGTTAACGA CGCAAATGCC GGCCGAGAAG
AAAGCGGAAT TGCATGAACA ATACATTGAT ATTCAGCTAC TACTAACCGG CGTCGAGCGT
ATTGCGTTTG GGATGTCCGG TGCCGCTCGC CAGTGCGAGG AGATGCACGT TGAAGAGGAT
TACCAGCTTT GTAGTCAAAT TGTCGACGAG CAGACTATTA CGCTGCAAGC GGGGATGTTT
GCTGTGTTTA TGCCGGGAGA ACCGCATAAA CCGGGATGTG CAGTGGGTGA GCCAGATGAC
ATCAAAAAAG TGGTAGTGAA AGTACGCGCC AGTCTGCTGG CGGCCTGA
|
|---|
| Protein sequence | MMMGEVQSLP SCGLHPRLLD ALTLALAARP QEKAPGRYEL QGDNVFMNVM QLTTQMPAEK
KAELHEQYID IQLLLTGVER IAFGMSGAAR QCEEMHVEED YQLCSQIVDE QTITLQAGMF
AVFMPGEPHK PGCAVGEPDD IKKVVVKVRA SLLAA
|
|---|
| |