Gene SNSL254_A3583 details

Gene Information

• Locus tag: SNSL254_A3583
• Symbol: ptsN
• ID: 6483699
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Newport str. SL254
• Kingdom: Bacteria
• Replicon accession: NC_011080
• Strand: +
• Start bp: 3468330
• End bp: 3468821
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642738863
• Product: PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN
• Protein accession: YP_002042580
• Protein GI: 194443058
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.686485
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 80
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATAAATA ACGATACGAC TCTACAACTG AGCAGTGTAC TTAACCAGGA GTGTACGCGT 
AGCGGCGTTC ATTGTCAGAG TAAGAAACGC GCGCTGGAAA TCATCAGCGA ACTGGCGGCA 
AAACAGCTCA GTTTACCTCC TCAGGTCGTG TTTGAAGCCA TTCTGACACG CGAAAAAATG 
GGCAGTACCG GTATTGGTAA TGGTATCGCC ATCCCGCACG GGAAACTGGA AGAAGATACC 
TTACGCGCCG TCGGCGTGTT CGTTCAGCTC GAAACGCCGA TCGCGTTCGA CGCCATCGAT 
AACCAGCCGG TCGATCTCCT CTTCGCCCTG CTGGTGCCCG CCGATCAAAC TAAAACGCAT 
CTGCACACGC TGTCGCTGGT GGCGAAACGT CTGGCGGATA AAACGATCTG CCGCCGCCTG 
CGCGCGGCGC TGAATGATGA AGAGCTGTAT CAAATCATTA CTGACACCGA AGGTGAGCAG 
AATGAGGCAT AA 

 

Protein sequence

MINNDTTLQL SSVLNQECTR SGVHCQSKKR ALEIISELAA KQLSLPPQVV FEAILTREKM 
GSTGIGNGIA IPHGKLEEDT LRAVGVFVQL ETPIAFDAID NQPVDLLFAL LVPADQTKTH 
LHTLSLVAKR LADKTICRRL RAALNDEELY QIITDTEGEQ NEA