Gene SNSL254_A3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3574 
Symbol 
ID6483478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3461005 
End bp3461817 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content58% 
IMG OID642738854 
Productputative ABC transporter ATP-binding protein YrbF 
Protein accessionYP_002042571 
Protein GI194444001 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCAGT CTGCGGCCAA TTTAGTCGAT ATGCGCGACG TCAGCTTTTC CCGTGGCGAA 
CGCTGCATTT TCGATAATAT TTCCCTGACG GTGCCGCGCG GGAAGATCAC GGCGATCATG
GGGCCGTCGG GCATCGGTAA AACCACGCTG TTGCGCCTGA TTGGCGGACA GATCCCGCCG
GATAAGGGCG AGATCTTATT TGATGGCGAG AATGTGCCGG CCATGTCCCG TTCGCGGCTC
TACACCGTCC GCAAACGTAT GAGTATGCTG TTTCAGTCGG GAGCGCTGTT TACCGACATG
AACGTGTTTG ACAATGTGGC CTATCCGCTA CGGGAGCACA CCAATTTACC CGCGCCGCTG
CTAAAAAGCG TCGTGATGAT GAAACTGGAA GCTGTCGGGC TGCGCGGCGC GGCAAAACTG
ATGCCTTCCG AGCTCTCCGG TGGGATGGCG CGCCGCGCCG CGTTGGCGCG CGCCATCGCT
CTGGAACCGG ATCTCATCAT GTTCGATGAG CCGTTTGTCG GCCAGGACCC GATTACCATG
GGCGTTCTGG TGAAGCTGAT TTCAGAATTG AACAGCGCGC TGGGCGTGAC CTGCGTGGTG
GTCTCGCATG ATGTGCCAGA GGTGCTCAGT ATTGCTGATC ACGCCTGGAT CATGGCGGAC
AAAAAAATCG TCGCTCACGG TAGCGCTCAG GCGTTGCAGG AGAATACGGA CCCGCGCGTG
CGTCAGTTCC TTGACGGCAT TGCCGACGGG CCGGTTCCGT TCCGCTATCC GGCGGGCGAC
TATCACCTTG ATTTACTCGA AACAGGGAGT TAA
 
Protein sequence
MGQSAANLVD MRDVSFSRGE RCIFDNISLT VPRGKITAIM GPSGIGKTTL LRLIGGQIPP 
DKGEILFDGE NVPAMSRSRL YTVRKRMSML FQSGALFTDM NVFDNVAYPL REHTNLPAPL
LKSVVMMKLE AVGLRGAAKL MPSELSGGMA RRAALARAIA LEPDLIMFDE PFVGQDPITM
GVLVKLISEL NSALGVTCVV VSHDVPEVLS IADHAWIMAD KKIVAHGSAQ ALQENTDPRV
RQFLDGIADG PVPFRYPAGD YHLDLLETGS