Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3573 |
Symbol | |
ID | 6485469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3460215 |
End bp | 3460997 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642738853 |
Product | toluene ABC transporter permease protein |
Protein accession | YP_002042570 |
Protein GI | 194443328 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGTTAA ATGCGCTGGC AGCACTCGGA CACAGCGGGA TCAAAACCGT CAGGACGTTC GGGCGCGCCG GGTTAATGTT ATTCAATGCG ATTATCGGTA AGCCGGAGTT TCGCAAACAT GCGCCGCTGC TGGTGCGCCA GCTTTATAAT GTGGGCGTCT TGTCAATGCT TATCATTATT GTCTCCGGCG TATTCATCGG TATGGTGCTG GGGCTGCAAG GCTATCTGGT TCTGACCACT TACAGCGCGG AGACCAGTCT TGGCATGTTA GTGGCGCTTT CGCTGCTGCG CGAGCTGGGG CCGGTGGTCG CGGCGTTGCT GTTTGCCGGG CGGGCCGGGT CGGCGTTGAC GGCGGAAATC GGCCTGATGC GGGCGACGGA GCAGCTCTCC AGTATGGAGA TGATGGCGGT CGATCCATTG CGCCGGGTGA TTTCGCCGCG CTTTTGGGCG GGCGTGATTT CATTGCCGCT ACTGACCATT ATCTTTGTGG CGGTCGGTAT CTGGGGCGGC TCGCTGGTCG GCGTAAGCTG GAAGGGAATC GACGCCGGGT TCTTCTGGTC CGCGATGCAG AATGCCGTCG ACTGGCGTAT GGACCTGGTG AACTGTCTGA TAAAGAGCGT GGTGTTCGCC ATTACGGTAA CATGGATTGC GTTATTCAAC GGTTATGACG CAATACCGAC TTCTGCCGGG ATTAGCCGGG CAACGACGCG TACCGTGGTT CACGCATCGT TGGCCGTTCT GGGGCTGGAT TTTGTGCTGA CCGCACTGAT GTTTGGGAAT TGA
|
Protein sequence | MLLNALAALG HSGIKTVRTF GRAGLMLFNA IIGKPEFRKH APLLVRQLYN VGVLSMLIII VSGVFIGMVL GLQGYLVLTT YSAETSLGML VALSLLRELG PVVAALLFAG RAGSALTAEI GLMRATEQLS SMEMMAVDPL RRVISPRFWA GVISLPLLTI IFVAVGIWGG SLVGVSWKGI DAGFFWSAMQ NAVDWRMDLV NCLIKSVVFA ITVTWIALFN GYDAIPTSAG ISRATTRTVV HASLAVLGLD FVLTALMFGN
|
| |