Gene SNSL254_A3573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3573 
Symbol 
ID6485469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3460215 
End bp3460997 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content58% 
IMG OID642738853 
Producttoluene ABC transporter permease protein 
Protein accessionYP_002042570 
Protein GI194443328 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTAA ATGCGCTGGC AGCACTCGGA CACAGCGGGA TCAAAACCGT CAGGACGTTC 
GGGCGCGCCG GGTTAATGTT ATTCAATGCG ATTATCGGTA AGCCGGAGTT TCGCAAACAT
GCGCCGCTGC TGGTGCGCCA GCTTTATAAT GTGGGCGTCT TGTCAATGCT TATCATTATT
GTCTCCGGCG TATTCATCGG TATGGTGCTG GGGCTGCAAG GCTATCTGGT TCTGACCACT
TACAGCGCGG AGACCAGTCT TGGCATGTTA GTGGCGCTTT CGCTGCTGCG CGAGCTGGGG
CCGGTGGTCG CGGCGTTGCT GTTTGCCGGG CGGGCCGGGT CGGCGTTGAC GGCGGAAATC
GGCCTGATGC GGGCGACGGA GCAGCTCTCC AGTATGGAGA TGATGGCGGT CGATCCATTG
CGCCGGGTGA TTTCGCCGCG CTTTTGGGCG GGCGTGATTT CATTGCCGCT ACTGACCATT
ATCTTTGTGG CGGTCGGTAT CTGGGGCGGC TCGCTGGTCG GCGTAAGCTG GAAGGGAATC
GACGCCGGGT TCTTCTGGTC CGCGATGCAG AATGCCGTCG ACTGGCGTAT GGACCTGGTG
AACTGTCTGA TAAAGAGCGT GGTGTTCGCC ATTACGGTAA CATGGATTGC GTTATTCAAC
GGTTATGACG CAATACCGAC TTCTGCCGGG ATTAGCCGGG CAACGACGCG TACCGTGGTT
CACGCATCGT TGGCCGTTCT GGGGCTGGAT TTTGTGCTGA CCGCACTGAT GTTTGGGAAT
TGA
 
Protein sequence
MLLNALAALG HSGIKTVRTF GRAGLMLFNA IIGKPEFRKH APLLVRQLYN VGVLSMLIII 
VSGVFIGMVL GLQGYLVLTT YSAETSLGML VALSLLRELG PVVAALLFAG RAGSALTAEI
GLMRATEQLS SMEMMAVDPL RRVISPRFWA GVISLPLLTI IFVAVGIWGG SLVGVSWKGI
DAGFFWSAMQ NAVDWRMDLV NCLIKSVVFA ITVTWIALFN GYDAIPTSAG ISRATTRTVV
HASLAVLGLD FVLTALMFGN