Gene SNSL254_A3562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3562 
SymbolobgE 
ID6486535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3452277 
End bp3453449 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content55% 
IMG OID642738842 
ProductGTPase ObgE 
Protein accessionYP_002042559 
Protein GI194444474 
COG category[R] General function prediction only 
COG ID[COG0536] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.238363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTG TTGATGAAGC ATCGATTCTG GTCGTTGCAG GCGATGGCGG TAATGGCTGT 
GTGAGCTTCC GCCGCGAAAA ATATATCCCG AAAGGCGGCC CGGACGGCGG TGATGGCGGC
GACGGCGGCG ACGTCTGGAT GGAAGCCGAT GAAAACCTGA ATACGCTGAT CGATTACCGC
TTTGAAAAAT CGTTCCGCGC TGAACGTGGT CAGAATGGCG CGAGCCGCGA CTGTACCGGT
AAACGCGGTA AAGACGTGAC CATCAAAGTG CCGGTCGGTA CGCGCGTTAT CGACCAGGGA
ACCGGTGAAA CGATGGGCGA CATGACCAAA CACGGTCAGC GTCTGTTGGT CGCGAAGGGC
GGCTGGCATG GGTTAGGCAA TACCCGTTTT AAATCCTCGG TTAACCGTAC GCCGCGCCAG
AAAACCAATG GTACGCCGGG CGATAAGCGC GACCTGCTGC TGGAACTGAT GCTGCTGGCG
GATGTCGGGA TGCTGGGGAT GCCAAACGCC GGTAAATCAA CGTTCATTCG CGCGGTATCG
GCAGCAAAAC CGAAAGTCGC GGACTATCCG TTTACCACGC TGGTGCCGAG CCTGGGCGTG
GTACGTATGG ACAGCGAAAA GAGTTTTGTG GTGGCCGACA TTCCGGGGTT GATCGAAGGC
GCGGCGGAAG GCGCGGGCCT GGGGATTCGC TTCCTGAAGC ACCTCGAACG TTGCCGCGTA
CTGCTGCACC TCATTGATAT CGATCCGATC GACGGTTCCG ATCCGGTGGA AAACGCCCGT
ATCATTATTG GCGAACTGGA AAAATACAGC CAGGATCTGG CGGCTAAACC GCGCTGGTTA
GTGTTCAACA AGATCGATCT GATGGATAAA ACCGAAGCGG AAGAGAAAGC GAAAGCGATC
GCCGAAGCGT TGGGCTGGGA AGGGAAATAC TATCTGATTT CCGCCGCCAG CCAGCTAGGG
GTGAAAGATC TCTGCTGGGA TGTGATGACC TTTATCATCG AGAATCCGAT CGCGCAGGCT
GAAGAAGCAA AACAGCCGGA AAAAGTCGAG TTCATGTGGG ACGATTATCA TCGTCAGCAG
TTGGCTGAAG TGGAAGAAGA CGCAGACGAT GACTGGGATG ACGACTGGGA TGAAGACGAC
GAAGAAGGCG TCGAGTTCAT CTACAAACGT TAA
 
Protein sequence
MKFVDEASIL VVAGDGGNGC VSFRREKYIP KGGPDGGDGG DGGDVWMEAD ENLNTLIDYR 
FEKSFRAERG QNGASRDCTG KRGKDVTIKV PVGTRVIDQG TGETMGDMTK HGQRLLVAKG
GWHGLGNTRF KSSVNRTPRQ KTNGTPGDKR DLLLELMLLA DVGMLGMPNA GKSTFIRAVS
AAKPKVADYP FTTLVPSLGV VRMDSEKSFV VADIPGLIEG AAEGAGLGIR FLKHLERCRV
LLHLIDIDPI DGSDPVENAR IIIGELEKYS QDLAAKPRWL VFNKIDLMDK TEAEEKAKAI
AEALGWEGKY YLISAASQLG VKDLCWDVMT FIIENPIAQA EEAKQPEKVE FMWDDYHRQQ
LAEVEEDADD DWDDDWDEDD EEGVEFIYKR