Gene SNSL254_A3557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3557 
Symbol 
ID6483267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3449501 
End bp3449833 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content47% 
IMG OID642738837 
ProductRNA-binding protein YhbY 
Protein accessionYP_002042554 
Protein GI194446513 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0252085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones94 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTT TTCAATCCCA ACGTAAGCAA AAATATACGA TGAATCTGAG TACTAAACAA 
AAACAGCACC TAAAAGGTCT GGCACATCCG CTCAAGCCTG TTGTTATGCT TGGCAATAAT
GGTTTGACCG AAGGGGTACT GGCCGAGATT GAACAAGCGT TAGAGCACCA TGAACTTATC
AAGGTGAAAA TCGCCTCGGA AGATCGCGAA ACAAAAACCT TGATCGTGGA CGCTATCGTG
CGCGAAACCG GCGCCTGTAA CGTACAGGTC ATCGGTAAAA CGCTGGTGCT GTATCGCCCA
ACTAAAGAGC GTAAAATCTC GCTGCCGCGT TAA
 
Protein sequence
MTRFQSQRKQ KYTMNLSTKQ KQHLKGLAHP LKPVVMLGNN GLTEGVLAEI EQALEHHELI 
KVKIASEDRE TKTLIVDAIV RETGACNVQV IGKTLVLYRP TKERKISLPR