Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3544 |
Symbol | infB |
ID | 6486240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3435670 |
End bp | 3438348 |
Gene Length | 2679 bp |
Protein Length | 892 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642738824 |
Product | translation initiation factor IF-2 |
Protein accession | YP_002042543 |
Protein GI | 194446734 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 106 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATG TAACCCTAAA AGCGCTGGCC GCAGAGAGAC AGGTTTCCGT GGATCGCCTG GTACAGCAGT TTGCTGATGC AGGTATCCGG AAATCTGCTG ACGACTCTGT GTCCGCACAA GAAAAACAGA CTTTACTGGC GCACCTGAAC CGCGAAGCGG TTTCTGGTCC CGATAAACTG ACGCTGCAGC GTAAAACGCG CAGCACCCTG AATATTCCAG GTACCGGTGG AAAAAGTAAA TCGGTACAAA TCGAAGTCCG CAAGAAGCGC ACCTTTGTGA AACGCGATCC GCAAGAGGCT GAACGCTTGG CCGCGGAAGA GCAGGCGCAG CGTGAAGCGG AAGAGCAAGC CCGTCGTGAG GCAGAAGAAC AGGCCAAACG CGAGGCGCAA CAAAAAGCTG AACGCGAGGC CGCAGAACAA GCTAAGCGTG AAGCCGCTGA AAAAGCGAAA CGTGAAGCTG CGGAAAAAGA CAAAGTGAGC AATCAACAGA CTGACGATAT GACCAAAACC GCCCAGGCCG AAAAAGCCCG CCGTGAGAAT GAAGCTGCAG AGCTGAAGCG TAAAGCGGAA GAAGAAGCAC GTCGCAAACT CGAAGAAGAA GCGCGTCGTG TAGCAGAAGA AGCTCGCCGC ATGGCGGAAG AAAACAAATG GACCGCAACG CCTGAGCCAG TAGAAGACAC CAGTGACTAT CATGTCACCA CTTCTCAGCA CGCGCGCCAG GCCGAAGACG AAAACGATCG TGAAGTAGAA GGCGGTCGTG GTCGTGGCCG TAATGCAAAA GCGGCGCGTC CGGCGAAAAA AGGCAAACAT GCCGAATCCA AAGCCGATCG CGAAGAAGCG CGTGCTGCGG TTCGCGGCGG TAAAGGCGGC AAGCGTAAAG GGTCTTCTTT ACAGCAAGGC TTCCAGAAGC CCGCTCAGGC CGTTAACCGT GACGTGGTGA TCGGTGAAAC CATCACCGTT GGCGAACTGG CGAACAAGAT GGCGGTTAAA GGCTCTCAGG TCATCAAAGC GATGATGAAG CTGGGCGCCA TGGCCACCAT CAACCAGGTC ATCGACCAGG AAACCGCACA GCTGGTTGCC GAAGAGATGG GCCACAAAGT TATCCTGCGT CGTGAAAACG AACTGGAAGA AGCGGTAATG AGCGACCGTG ATACCGGCGC TGCGGCTGAA CCGCGCGCAC CGGTTGTGAC CATCATGGGT CACGTTGACC ACGGTAAAAC CTCTCTGCTG GACTACATTC GTTCCACGAA AGTGGCCTCT GGCGAAGCGG GCGGCATTAC CCAGCACATC GGTGCTTACC ACGTTGAAAC TGACAACGGG ATGATCACCT TCCTGGACAC CCCGGGTCAC GCCGCGTTTA CTTCCATGCG TGCTCGCGGC GCCCAGGCAA CGGATATCGT GGTTCTGGTG GTAGCGGCAG ACGACGGCGT GATGCCGCAG ACTATCGAAG CTATCCAGCA CGCGAAAGCG GCAGGTGTGC CGGTCGTGGT TGCGGTGAAC AAAATCGATA AGCCGGAAGC CGATCCGGAT CGCGTTAAGA ACGAACTGTC CCAGTACGGC ATTCTGCCGG AAGAGTGGGG CGGCGAGAGC CAGTTCGTTC ACGTGTCTGC GAAAGCGGGC ACCGGTATCG ACGAACTGCT GGACGCTATC CTGCTGCAGG CCGAAGTTCT GGAACTGAAA GCGGTACGCA AAGGTATGGC GAGCGGTGCG GTGATCGAAT CCTTCCTGGA TAAAGGTCGT GGTCCGGTGG CTACCGTGCT GGTTCGTGAA GGTACGCTGC ATAAGGGCGA TATCGTGCTG TGTGGCTTCG AATACGGCCG CGTGCGTGCG ATGCGTAACG AACTGGGTCA GGAAGTGCTG GAAGCGGGTC CGTCCATTCC GGTGGAAATC CTCGGCCTGT CCGGCGTTCC GGCTGCCGGT GACGAAGTGA CCGTCGTTCG TGACGAGAAG AAAGCGCGTG AAGTTGCTCT GTATCGTCAG GGTAAATTCC GTGAAGTTAA ACTGGCTCGT CAGCAGAAAT CTAAACTCGA GAACATGTTC GCCAACATGA CCGAAGGCGA AGTTCACGAA GTGAACATCG TCCTGAAGGC CGACGTACAG GGTTCTGTGG AAGCGATCTC CGACTCTTTG CTGAAACTGT CTACCGACGA AGTGAAAGTG AAGATCATCG GTTCTGGCGT AGGTGGTATC ACCGAAACCG ACGCGACCCT GGCTGCGGCG TCCAACGCGA TTCTGGTGGG CTTCAACGTT CGTGCTGATG CTTCTGCGCG TAAAGTGATC GAATCTGAAA GCCTGGATCT GCGTTACTAC TCCGTCATCT ATAACCTGAT CGACGAAGTG AAAGCGGCTA TGAGCGGTAT GCTGTCTCCG GAACTGAAAC AGCAGATCAT CGGTCTGGCT GAAGTGCGCG ATGTGTTCAA ATCGCCGAAA TTCGGCGCGA TCGCGGGCTG TATGGTTACC GAAGGTACAA TTAAACGCCA TAACCCAATC CGCGTTCTGC GCGACAACGT GGTTATCTAT GAAGGCGAGC TGGAATCCCT GCGCCGCTTC AAAGATGACG TTAACGAAGT CCGTAACGGC ATGGAATGTG GTATCGGCGT GAAGAACTAC AACGACGTTC GCGTTGGCGA TATGATTGAA GTATTCGAAA TTATCGAGAT CCAACGTACC ATCGCTTAA
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Protein sequence | MTDVTLKALA AERQVSVDRL VQQFADAGIR KSADDSVSAQ EKQTLLAHLN REAVSGPDKL TLQRKTRSTL NIPGTGGKSK SVQIEVRKKR TFVKRDPQEA ERLAAEEQAQ REAEEQARRE AEEQAKREAQ QKAEREAAEQ AKREAAEKAK REAAEKDKVS NQQTDDMTKT AQAEKARREN EAAELKRKAE EEARRKLEEE ARRVAEEARR MAEENKWTAT PEPVEDTSDY HVTTSQHARQ AEDENDREVE GGRGRGRNAK AARPAKKGKH AESKADREEA RAAVRGGKGG KRKGSSLQQG FQKPAQAVNR DVVIGETITV GELANKMAVK GSQVIKAMMK LGAMATINQV IDQETAQLVA EEMGHKVILR RENELEEAVM SDRDTGAAAE PRAPVVTIMG HVDHGKTSLL DYIRSTKVAS GEAGGITQHI GAYHVETDNG MITFLDTPGH AAFTSMRARG AQATDIVVLV VAADDGVMPQ TIEAIQHAKA AGVPVVVAVN KIDKPEADPD RVKNELSQYG ILPEEWGGES QFVHVSAKAG TGIDELLDAI LLQAEVLELK AVRKGMASGA VIESFLDKGR GPVATVLVRE GTLHKGDIVL CGFEYGRVRA MRNELGQEVL EAGPSIPVEI LGLSGVPAAG DEVTVVRDEK KAREVALYRQ GKFREVKLAR QQKSKLENMF ANMTEGEVHE VNIVLKADVQ GSVEAISDSL LKLSTDEVKV KIIGSGVGGI TETDATLAAA SNAILVGFNV RADASARKVI ESESLDLRYY SVIYNLIDEV KAAMSGMLSP ELKQQIIGLA EVRDVFKSPK FGAIAGCMVT EGTIKRHNPI RVLRDNVVIY EGELESLRRF KDDVNEVRNG MECGIGVKNY NDVRVGDMIE VFEIIEIQRT IA
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