Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3531 |
Symbol | |
ID | 6485107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3422948 |
End bp | 3423472 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642738814 |
Product | sterol-binding protein |
Protein accession | YP_002042533 |
Protein GI | 194444377 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3154] Putative lipid carrier protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 107 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTAGATA AACTGCGTTC ACGCTTAGTC CATGCTGGCC CGTCTCTGAT GAGTGTACCG GTTAAACTGA CGCCCTTTGC GCTAAAGCGC CAGGTTCTGG AACAGGTTCT GAGCTGGCAG TTTCGTCAGG CGCTGGCCGA TGGAGAGCTG GAATTCCTCG AAGGTCGTTG GTTAAGCATT CATGTTCGTG ACATCGACTT AAAATGGTAT ACCACGGTTG AAAATGAAAA GCTGATCGTT AGCCAGCAGG CGGATGCTGA CGTCAGTTTT AGCGCCGACG CCAGCGATCT GCTAATGATC GCCGCCCGTA AACAGGATCC GGATACGCTC TTTTTCCAGC GTCGACTGGT CATTGAAGGC GATACTGAGT TAGGGTTGTA TGTGAAGAAT CTGATGGACG CCATCGAACT GGAGCAGATG CCGAAAGCGT TACGCGTTAT GCTGCTGCAA CTGGCGGATT TTGTTGAGGC GGGAATGAAA AACTCGCCGG AAACCAAACA GACCTCGGTA GGTGAACCAT GCTAA
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Protein sequence | MLDKLRSRLV HAGPSLMSVP VKLTPFALKR QVLEQVLSWQ FRQALADGEL EFLEGRWLSI HVRDIDLKWY TTVENEKLIV SQQADADVSF SADASDLLMI AARKQDPDTL FFQRRLVIEG DTELGLYVKN LMDAIELEQM PKALRVMLLQ LADFVEAGMK NSPETKQTSV GEPC
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