Gene SNSL254_A3531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3531 
Symbol 
ID6485107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3422948 
End bp3423472 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content51% 
IMG OID642738814 
Productsterol-binding protein 
Protein accessionYP_002042533 
Protein GI194444377 
COG category[I] Lipid transport and metabolism 
COG ID[COG3154] Putative lipid carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones107 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAGATA AACTGCGTTC ACGCTTAGTC CATGCTGGCC CGTCTCTGAT GAGTGTACCG 
GTTAAACTGA CGCCCTTTGC GCTAAAGCGC CAGGTTCTGG AACAGGTTCT GAGCTGGCAG
TTTCGTCAGG CGCTGGCCGA TGGAGAGCTG GAATTCCTCG AAGGTCGTTG GTTAAGCATT
CATGTTCGTG ACATCGACTT AAAATGGTAT ACCACGGTTG AAAATGAAAA GCTGATCGTT
AGCCAGCAGG CGGATGCTGA CGTCAGTTTT AGCGCCGACG CCAGCGATCT GCTAATGATC
GCCGCCCGTA AACAGGATCC GGATACGCTC TTTTTCCAGC GTCGACTGGT CATTGAAGGC
GATACTGAGT TAGGGTTGTA TGTGAAGAAT CTGATGGACG CCATCGAACT GGAGCAGATG
CCGAAAGCGT TACGCGTTAT GCTGCTGCAA CTGGCGGATT TTGTTGAGGC GGGAATGAAA
AACTCGCCGG AAACCAAACA GACCTCGGTA GGTGAACCAT GCTAA
 
Protein sequence
MLDKLRSRLV HAGPSLMSVP VKLTPFALKR QVLEQVLSWQ FRQALADGEL EFLEGRWLSI 
HVRDIDLKWY TTVENEKLIV SQQADADVSF SADASDLLMI AARKQDPDTL FFQRRLVIEG
DTELGLYVKN LMDAIELEQM PKALRVMLLQ LADFVEAGMK NSPETKQTSV GEPC