Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3526 |
Symbol | |
ID | 6485059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3420402 |
End bp | 3421037 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642738809 |
Product | NAD dependent epimerase/dehydratase family protein |
Protein accession | YP_002042528 |
Protein GI | 194446577 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 102 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGG TACTGATTAC CGGCGCGACC GGACTGGTCG GCGGACATCT GCTGAGAATG TTAATCAACA CGCCGCAGGT GAGCGCTATC GCCGCGCCGA CGCGTCGCCC GCTGACGGAT ATTGTCGGCG TTTATAACCC TCACGATCCG CAGCTTACCG ACGCGTTAGC TCAGGTGACC GACCCGGTGG ATATTGTTTT TTGCTGCCTG GGCACGACCC GGCGTGAAGC GGGAAGTAAA GCGGCGTTTA TTCATGCGGA TTATACGCTG GTGGTTGATA CCGCGCTGAC CGGGCGTCGA CTGGGCGCGC AGCACATGTT GGTGGTCAGC GCAATGGGAG CAAACGCGCA CTCTCCGTTT TTCTACAATC GGGTGAAAGG AGAAATGGAG GAGGCGTTAA TCGCGCAAAA TTGGCCTCGT TTGACGATTG CCCGGCCTTC TATGCTGCTC GGCGACAGAA CAACGCGGCG GGTGAATGAA ACGCTTTTCG CTCCGCTATT TCGGCTGTTG CCAGGAAACT GGAAATCGAT TGATGCGCGG GATGTGGCGC GGGCCATGCT GGCGGAAGCG CTGGCGCCAG CACAAGAAGG CGTGACGATT CTGACCTCAT CGCAACTGCG GGAAAAAGCG GGGTAG
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Protein sequence | MSQVLITGAT GLVGGHLLRM LINTPQVSAI AAPTRRPLTD IVGVYNPHDP QLTDALAQVT DPVDIVFCCL GTTRREAGSK AAFIHADYTL VVDTALTGRR LGAQHMLVVS AMGANAHSPF FYNRVKGEME EALIAQNWPR LTIARPSMLL GDRTTRRVNE TLFAPLFRLL PGNWKSIDAR DVARAMLAEA LAPAQEGVTI LTSSQLREKA G
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