Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3525 |
Symbol | |
ID | 6486140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3419760 |
End bp | 3420335 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642738808 |
Product | hypothetical protein |
Protein accession | YP_002042527 |
Protein GI | 194445022 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.950572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 97 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCAT TTTCGCCGCT CGCAGTCCTT ATTTCTGCGT TGCTATTGCA AGGTTGCGTC GCCGCCGCGG TAGTGGGTAC GGCAGCCGTC GGCACCAAAG CCGCAACCGA CCCGCGTAGC GTGGGCACCC AGGTGGATGA CGGAACGCTG GAACTGCGTG TCAGCAGCGC GCTGTCGAAA GATGAGCAAA TCAAAAAAGA GACGCGCATC AATGTCACGG CTTATCAGGG CAAAGTTTTG TTAGTGGGCC AGTCGCCAAA CAGCGAACTC TCCGCACGCG CTAAACAGAT AGCGATGGGC GTTGAAGGCA CCACCGAGGT CTATAACGAG ATTCGCCAGG GTCAGCCTAT CGGCCTGGGG ACCGCCTCTA ACGATACCTG GATCACCACG AAAGTTCGCT CACAGCTACT GACCAGCGAT CAGGTAAAAT CGTCAAACGT GAAAGTCACC ACCGAAAATG GCGAAGTGTT CCTGCTGGGC CTGGTGACTG AACGTGAAGG TAAAGCGGCA GCGGACATCG CCAGCCGGGT GAGCGGCGTG AAACGCGTGA CTACCGCCTT TACGTATATT AAGTAA
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Protein sequence | MKAFSPLAVL ISALLLQGCV AAAVVGTAAV GTKAATDPRS VGTQVDDGTL ELRVSSALSK DEQIKKETRI NVTAYQGKVL LVGQSPNSEL SARAKQIAMG VEGTTEVYNE IRQGQPIGLG TASNDTWITT KVRSQLLTSD QVKSSNVKVT TENGEVFLLG LVTEREGKAA ADIASRVSGV KRVTTAFTYI K
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